DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17612 and CG8944

DIOPT Version :10

Sequence 1:NP_608824.1 Gene:CG17612 / 33639 FlyBaseID:FBgn0031597 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_573065.1 Gene:CG8944 / 32517 FlyBaseID:FBgn0030680 Length:762 Species:Drosophila melanogaster


Alignment Length:792 Identity:138/792 - (17%)
Similarity:242/792 - (30%) Gaps:334/792 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 CLQC----LHMDTF----GTKHKGPRPETQINDKVHLE----MSINGEDGLPEHPLYPEVQLVVK 79
            |:.|    |:.|:|    .|.|.|.:.....:.::...    ||::|.:|  :.|.:.|::.:..
  Fly    38 CIFCSEKFLYFDSFIGHMQTVHLGDQSVANTSSRLPFNLGEPMSLSGRNG--DLPNFHEIEDLTD 100

  Fly    80 EEDALIKKKVIEENHIHNEEIIGASNIVDVEVHENHRANNDVILIQDSFAEEVILEDHPANNDVI 144
            .:.||::.::                ::..|:.:...:::||:..::. .:|..|.|..|:.|..
  Fly   101 ADTALLEPQM----------------VIKQELQDLPCSDDDVVAGEED-DDEQRLNDSEADEDEA 148

  Fly   145 IIQDSVAEEELPVI-------------------KEEAIEG-----------------EDLQGEYF 173
            |:.:|    ::||:                   .|..|.|                 :|..|||.
  Fly   149 ILPES----DVPVVSSKTRARKKVTKQRQRDMSSELLIAGDGDSSMDDYGDPDHSYMDDNSGEYM 209

  Fly   174 IIT--------------------ECLEEPAIGSCR------------------------------ 188
            ...                    |.:||..:|..|                              
  Fly   210 DFAGFDGVNHSGFGTESDFLSYDEMVEESLLGRDREVTMHIKDRKMIQFLIHSYQRNPFLWDHGN 274

  Fly   189 ---------------VCLE----------------QSDNL---------------TNI------- 200
                           :.||                :.|||               |||       
  Fly   275 AQFRDRVKRARFLDWIVLEFKSRFNISLAKDAITRKWDNLRTVYKRECNRMALEKTNISTLWYFK 339

  Fly   201 ----FDDAHQYGIPIATILSQYTGMPVEKGDSFSEYICVTCLDVVK------NAFD-DLESKENT 254
                .::.:.|...::..:.:.|.........:::......|.:||      |.|| |..|||..
  Fly   340 ELHFLNEVYSYNDKMSDAVVKETSYRRRFSAIWNDTSTAKLLSMVKRYQCFYNRFDPDYRSKERR 404

  Fly   255 IQMYRQ---PKEEIIDIDSIPVKNK----PVDYEVTGKPPHRCPQCPKIFLLAAKLQAHIRTHNE 312
            .:...|   ..:::||:.:|.:..:    ..||.                  ..|::   |.::|
  Fly   405 GEGLHQMAIELQQLIDVTTIQISKRISQLRFDYS------------------KQKME---RLNSE 448

  Fly   313 TRTTEPPRL-KCPMCPSIYMKRGCLEAHMWIHRASDERESELEPPYRCPHCPKLFLYSSFLEIHI 376
                   || |..:...:|..:        :|...|:     .||::|.|||::......|::|:
  Fly   449 -------RLGKKFIANYLYYDQ--------MHFMDDD-----IPPFKCAHCPEIVQTLRELDLHM 493

  Fly   377 QTHEDVSQRLSRKSSHKCAQCADVFSDVSSLKDHVKIHAG---ERTFKCPLCLMSFQEESNLKSH 438
            .||:.     |....:.|..|:..|.:.....:|.::|.|   |..|.|.||..||:|::|...|
  Fly   494 LTHQP-----SLGGGYYCNICSIQFHNAQEFDNHKQLHLGGVTEIKFNCELCTASFREKANYDEH 553

  Fly   439 DCAHTR----------------------------------------------------------- 444
            ...|..                                                           
  Fly   554 LRRHNEELFLPSLALNHSIMEGGLGDDEIGVEGEESRGSGSRRKRRHAAKATDDMVDDDDRIGGG 618

  Fly   445 ---------------FKCHKCSKFFESQNYLDFHFKKSHTTKGP--FKC--IKCQQTFQKRNGLK 490
                           :.|..|.:.|.:..:|:.| :..|..:..  :||  .:|.::|..||.|.
  Fly   619 GGGGSGGGGTDIAKPYGCDVCRRSFATPGHLNAH-RIVHQDERERCYKCDYPQCNKSFVARNSLF 682

  Fly   491 EHISSQVCVQFLRSKSPGQIFPCPKCPKKFSIEDNYQMHHATHKKVKTVIERHNCTQCKKSYQNK 555
            ||         |:.....:.|.|..|.|.|....|.|.|...|.|:|    |:.|..|..::...
  Fly   683 EH---------LKQHYSNEEFKCDICGKTFKSTKNLQNHKQIHDKIK----RYVCQICGSAFAQA 734

  Fly   556 KLLTKHILSHNR 567
            ..|..|...|||
  Fly   735 AGLYLHKRRHNR 746

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17612NP_608824.1 zf-AD 187..>246 CDD:462262 15/151 (10%)
C2H2 Zn finger 290..310 CDD:275368 2/19 (11%)
C2H2 Zn finger 323..343 CDD:275370 1/19 (5%)
C2H2 Zn finger 359..379 CDD:275368 6/19 (32%)
C2H2 Zn finger 394..414 CDD:275368 4/19 (21%)
C2H2 Zn finger 422..438 CDD:275368 7/15 (47%)
C2H2 Zn finger 447..463 CDD:275368 4/15 (27%)
C2H2 Zn finger 476..505 CDD:275368 9/30 (30%)
C2H2 Zn finger 513..533 CDD:275368 7/19 (37%)
C2H2 Zn finger 545..565 CDD:275368 4/19 (21%)
C2H2 Zn finger 568..584 CDD:275368 138/792 (17%)
CG8944NP_573065.1 MADF_DNA_bdg 259..344 CDD:463144 8/84 (10%)
MADF 379..472 CDD:214738 25/133 (19%)
C2H2 Zn finger 476..496 CDD:275368 6/19 (32%)
C2H2 Zn finger 506..526 CDD:275368 4/19 (21%)
C2H2 Zn finger 537..557 CDD:275368 8/19 (42%)
C2H2 Zn finger 636..656 CDD:275368 5/20 (25%)
COG5048 <666..734 CDD:227381 23/80 (29%)
C2H2 Zn finger 666..688 CDD:275368 9/30 (30%)
C2H2 Zn finger 696..716 CDD:275368 7/19 (37%)
C2H2 Zn finger 724..744 CDD:275368 4/19 (21%)

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