Protein Alignment Traf4 and Traf1

DIOPT Version :9

• Sequence 1: NP_477416.1
• Gene: Traf4 / 33638
• FlyBaseID: FBgn0026319
• Length: 486
• Species: Drosophila melanogaster
• Sequence 2: NP_001258169.1
• Gene: Traf1 / 687813
• RGDID: 1596290
• Length: 409
• Species: Rattus norvegicus
• Alignment Length: 367
• Identity: 95/367 - (25%)
• Similarity: 142/367 - (38%)
• Gaps: 135/367 - (36%)

  Fly   244 CPQRCDAG---PIPRGEL---EAHLRDECQSLAVSCSFKEAGCRFKGPRQMLEAH---------- 292
            || :|.|.   |:..|.|   |..|.|..:: .:.|.|...||.|||..|.::.|
  Rat    48 CP-KCRADGLQPVSPGSLLTQEKVLPDVAEA-GIVCPFAGVGCSFKGSPQSVQEHEATSQSSHLY 110

  Fly   293 -----------------------LESN-------------------------------------- 296
                                   ||.|
  Rat   111 LLLGVLKEWKSSPGPNLGSAPMALEQNLSELQLQEAVEVTGDLEVDCYRAPCCESQEELALQHLL 175

  Fly   297 --------------------------AAAHLSL--------------------MVALSSRQGQQI 315
                                      .|:||:|                    :|.|.....|:.
  Rat   176 KEKLLAQLEEKLRVFANIVAVLNKEVEASHLALAASIHQSQLDREHVLNLEQRVVELQQTLAQKD 240

  Fly   316 QMLKSAVSKLSI----NYTGTLLWKITDWSAKMAEARGKDGLELVSPPFYTSQYGYKLQASMFLN 376
            |:|......|.:    ::.||.|||||:.:.:..|:.....:.|.||.|||::|||||...::||
  Rat   241 QVLGKLEHSLRLMEEASFDGTFLWKITNVTKRCHESVCGRTVSLFSPAFYTAKYGYKLCLRLYLN 305

  Fly   377 GNGPGENTHVSVYIKVLPGEYDALLKWPFSHSITFTLFEQGAQSGQGGVAESFVPDPTWENFQRP 441
            |:|.|:.||:|::|.::.|||||||.|||.:.:||.|.:   |:.:....::|.||.:..:||||
  Rat   306 GDGSGKKTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLD---QNNREHAIDAFRPDLSSASFQRP 367

  Fly   442 SNEPDQLGFGFPRFISHELLHS--RPFIKGDTVFLRVKVDPS 481
            .:|.: :..|.|.|.....|.|  ..::|.||:||:..||.|
  Rat   368 QSETN-VASGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVDTS 408

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Traf4	NP_477416.1	PLN03086	<109..206	CDD:178635
		zf-TRAF	233..292	CDD:424248	18/53 (34%)
		MATH_TRAF4	331..479	CDD:239750	60/149 (40%)
Traf1	NP_001258169.1	TRAF_BIRC3_bd	180..237	CDD:406958	6/56 (11%)
		MATH_TRAF1	260..406	CDD:239748	60/149 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D391991at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.920