Sequence 1: | NP_477416.1 | Gene: | Traf4 / 33638 | FlyBaseID: | FBgn0026319 | Length: | 486 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001073654.1 | Gene: | traf7 / 563746 | ZFINID: | ZDB-GENE-070112-2212 | Length: | 639 | Species: | Danio rerio |
Alignment Length: | 424 | Identity: | 93/424 - (21%) |
---|---|---|---|
Similarity: | 153/424 - (36%) | Gaps: | 129/424 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 QWTKTLSFPSRLSPNRNSKDCSTLASPVPPPTPPRNKTTSGSGNCATSRSSSS-TVSSSHSSSHS 70
Fly 71 SPTPGNNNNNMPITELEQIIYP---GPDPKHIMGSLVFCIHHKQGC--KWSDELRKLKGH--LNA 128
Fly 129 CKHDATQCP---NKCGAQIPRIMMTDHLQYTCTMRRTRCEF-CQSEFSGAGLEEHNGSCGQEPVY 189
Fly 190 CEAKCGQRILRGRMTLHKSKDCAKRLRRCAHCQREFSADTLPLHAAQCPRAPLACPQRCDAGPIP 254
Fly 255 RGELEAHLRDECQSLAVSCSFKEAGCRFKGPRQMLEAHLE-------------SNAAAHLSLMVA 306
Fly 307 LSSRQGQQIQMLKSAVSKLS-----INYTGTLLWKITDWS-AKMAEARGKDGLELVSPPFYTSQY 365
Fly 366 GYKLQASMFLNGNGPGENTHVSVYIKV-LPGEYD 398 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Traf4 | NP_477416.1 | PLN03086 | <109..206 | CDD:178635 | 17/104 (16%) |
zf-TRAF | 233..292 | CDD:424248 | 19/58 (33%) | ||
MATH_TRAF4 | 331..479 | CDD:239750 | 16/70 (23%) | ||
traf7 | NP_001073654.1 | RING | 100..132 | CDD:214546 | 7/34 (21%) |
Sina | 141..>249 | CDD:302762 | 31/150 (21%) | ||
Snapin_Pallidin | 260..342 | CDD:291383 | 23/104 (22%) | ||
WD40 | <349..637 | CDD:225201 | 2/2 (100%) | ||
WD40 | 357..637 | CDD:238121 | |||
WD40 repeat | 368..406 | CDD:293791 | |||
WD40 repeat | 412..446 | CDD:293791 | |||
WD40 repeat | 451..486 | CDD:293791 | |||
WD40 repeat | 493..525 | CDD:293791 | |||
WD40 repeat | 531..565 | CDD:293791 | |||
WD40 repeat | 573..608 | CDD:293791 | |||
WD40 repeat | 615..637 | CDD:293791 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |