Protein Alignment Traf4 and traf2b

DIOPT Version :9

• Sequence 1: NP_477416.1
• Gene: Traf4 / 33638
• FlyBaseID: FBgn0026319
• Length: 486
• Species: Drosophila melanogaster
• Sequence 2: XP_005165556.1
• Gene: traf2b / 557526
• ZFINID: ZDB-GENE-030131-5345
• Length: 532
• Species: Danio rerio
• Alignment Length: 452
• Identity: 110/452 - (24%)
• Similarity: 177/452 - (39%)
• Gaps: 127/452 - (28%)

  Fly   127 NACKHDATQCPNKCGAQIPRIMMTDHLQYTCTMRRTRCEFCQSEFSGAGLEEHNGSCGQEPVYCE 191
            ||.:.:....|.||..:            .|:...|..:|         ..:|.|.|..|.|.||
Zfish   105 NAARREIDSLPAKCPNE------------GCSWSGTLKDF---------ENQHEGRCAFERVKCE 148

  Fly   192 AKCGQRILRGRMTLHKSKDCAKRLRRCAHCQREFSADTLPLHAAQCPRAPLACPQRCDAGPIPRG 256
            | |...||......|..::|..|...|.:|:..|:...:..|...|.:.|:.| :.|....|||.
Zfish   149 A-CQVLILLSEKDRHNERECEARTLNCKYCKVTFNFKEIKAHDEICQKFPMQC-KDCGKKKIPRE 211

  Fly   257 ELEAHLRDECQSLAVSCSFKEAGCRFKGPRQMLEAHLESNAAAHLSLMVALSS------------ 309
            :.:.|.: .|.....:|.|:|.|||........:.|.:::...||.||:||.|
Zfish   212 KFQEHTK-SCAKSKSACQFREIGCRAVVDNCKQQEHEQTSIMEHLRLMLALLSSMRLRAEGAGEW 275

  Fly   310 ------------------------RQG-------------------------------------- 312
                                    |.|
Zfish   276 QEDVGLGLYRGPEDAPPAGAHNVGRGGGPGVQKKVTTLENIVCVLNKEVERSALTMEAISRQHRL 340

  Fly   313 --QQIQMLKSAVSKLS----------------------INYTGTLLWKITDWSAKMAEARGKDGL 353
              ::|:.|.:.|.:|.                      ..|.|..:|||.::|.:..:|......
Zfish   341 DQEKIENLSNKVRQLERTLTTRDLQLAESEQSLRELQFCTYDGVFIWKIAEFSRRRQDAVAGRAP 405

  Fly   354 ELVSPPFYTSQYGYKLQASMFLNGNGPGENTHVSVYIKVLPGEYDALLKWPFSHSITFTLFEQGA 418
            .:.||.||:|:||||:...::|||:|.|..:|:|::..|:.|:||||||||||..:|..|.:
Zfish   406 AMFSPAFYSSKYGYKMCLRLYLNGDGTGRGSHLSLFFVVMKGKYDALLKWPFSQKVTLMLLD--- 467

  Fly   419 QSGQGGVAESFVPDPTWENFQRPSNEPDQLGFGFPRFIS-HELLHSRPFIKGDTVFLRVKVD 479
            |:.:..:.::|.||.:..:||||.:|.: :..|.|.|.. .:|.....:::.||:|::..||
Zfish   468 QNNREHIIDAFRPDVSSTSFQRPISEMN-IASGCPLFCPLAKLAGKSSYLRDDTIFIKAIVD 528

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Traf4	NP_477416.1	PLN03086	<109..206	CDD:178635	19/78 (24%)
		zf-TRAF	233..292	CDD:424248	16/58 (28%)
		MATH_TRAF4	331..479	CDD:239750	52/148 (35%)
traf2b	XP_005165556.1	RING	44..86	CDD:238093
		zf-TRAF	189..246	CDD:280357	16/58 (28%)
		TRAF_BIRC3_bd	307..359	CDD:293278	4/51 (8%)
		MATH_TRAF2	365..528	CDD:239747	53/166 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D391991at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.920