Sequence 1: | NP_477416.1 | Gene: | Traf4 / 33638 | FlyBaseID: | FBgn0026319 | Length: | 486 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001261904.1 | Gene: | elgi / 39735 | FlyBaseID: | FBgn0283649 | Length: | 315 | Species: | Drosophila melanogaster |
Alignment Length: | 241 | Identity: | 47/241 - (19%) |
---|---|---|---|
Similarity: | 80/241 - (33%) | Gaps: | 61/241 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 72 PTPGNNNNNMPITELEQIIYPGPDPKHIMGSL----VFCIHHKQGCKWSDELRKLKGHLNACKHD 132
Fly 133 ATQ---CPNKCGAQIPRIMMTDHLQYTCTMRRTRCEFCQSEFSGAGLEEHNGSCGQEPVYCEAKC 194
Fly 195 GQRILRGRMTLHKSKDCAKRLRRCAHCQR----EFSADTLPLHAAQCPRA-------PLACPQRC 248
Fly 249 DAGPIPRGELEAHLRDECQSLAVSCSFKEAGCRFKGPRQMLEAHLE 294 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Traf4 | NP_477416.1 | PLN03086 | <109..206 | CDD:178635 | 22/99 (22%) |
zf-TRAF | 233..292 | CDD:424248 | 11/65 (17%) | ||
MATH_TRAF4 | 331..479 | CDD:239750 | |||
elgi | NP_001261904.1 | RING | 17..55 | CDD:238093 | 2/3 (67%) |
Sina | 83..>157 | CDD:302762 | 20/79 (25%) | ||
USP8_interact | 137..315 | CDD:286082 | 25/146 (17%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D918518at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |