Protein Alignment Traf4 and rnf41l

DIOPT Version :10

• Sequence 1: NP_477416.1
• Gene: Traf4 / 33638
• FlyBaseID: FBgn0026319
• Length: 486
• Species: Drosophila melanogaster
• Sequence 2: XP_068070244.1
• Gene: rnf41l / 337495
• ZFINID: ZDB-GENE-030131-9441
• Length: 301
• Species: Danio rerio
• Alignment Length: 307
• Identity: 60/307 - (19%)
• Similarity: 93/307 - (30%)
• Gaps: 101/307 - (32%)

  Fly    65 HSSSHSSPTPGNNNNNMPITELEQIIYPGPDPKHIMGSL----VFCIHHKQGCKWSDELRKLKGH 125
            |:|......|      :.||.|..:.      :::...|    |.|:...|||:....|..:..|
Zfish    49 HNSCPEDRLP------LDITHLRPLF------RYMRNDLARLQVRCVFRPQGCEVICALESIHRH 101

  Fly   126 LNACKHDATQCPNKCGAQIPRIMMTDHLQYTCTMRRTRCEFCQSEFSGAGLEEHNGSCGQEPVYC 190
            ...|.:....|.|         ...::|.|.|.        |..:.|...||.|...|......|
Zfish   102 EQQCDYALLNCTN---------TGDEYLCYRCG--------CPVQVSRRSLEAHLCVCEYSSRVC 149

  Fly   191 EAKCGQRILRGRMTLHKSKDCAKRLRRCAHCQREFSADTLPLHAAQCPRAPLACPQRCDAGPIPR 255
            .:.||..||......|   :|...||.        ..|.|                        |
Zfish   150 ASGCGYTILNTDEAQH---NCVSELRA--------ELDML------------------------R 179

  Fly   256 GELEAHLRDECQSLAVSCSFKEAGCRFKGPRQMLEAHLESNAAAHLSLMVALSSRQGQQIQMLKS 320
            .||:                    |:.:..|..:|:.|:|. ..|   ||...|....::..||:
Zfish   180 AELD--------------------CKVEEVRHEMESRLDSQ-RRH---MVQKESLLRSEVDELKA 220

  Fly   321 AVSKLSINYTGTL---------LWKITDWSAKMAEARGKDGLELVSP 358
            .:|::..:....|         |.:.....|::.|...|:||...:|
Zfish   221 QLSRVMSDVRVLLGAERARRQELERAELEKAELLELLKKEGLRPATP 267

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Traf4	NP_477416.1	PLN03086	<109..206	CDD:178635	22/96 (23%)
		zf-TRAF	233..292	CDD:280357	6/58 (10%)
		MATH_TRAF4	331..479	CDD:239750	8/37 (22%)
rnf41l	XP_068070244.1	RAD18	16..>102	CDD:227719	13/64 (20%)
		RING_Ubox	16..56	CDD:473075	2/6 (33%)
		Fzo_mitofusin	<165..227	CDD:461432	21/120 (18%)