Protein Alignment Traf4 and Traf-like

DIOPT Version :9

• Sequence 1: NP_477416.1
• Gene: Traf4 / 33638
• FlyBaseID: FBgn0026319
• Length: 486
• Species: Drosophila melanogaster
• Sequence 2: NP_727976.1
• Gene: Traf-like / 32611
• FlyBaseID: FBgn0030748
• Length: 474
• Species: Drosophila melanogaster
• Alignment Length: 509
• Identity: 109/509 - (21%)
• Similarity: 179/509 - (35%)
• Gaps: 126/509 - (24%)

  Fly    58 SSTVSSSHSSSHSSPTPGNNNNNMPITELEQIIYPGPDPKHIMGSLVFCIHHKQGCKWSDELRKL 122
            |.|.|||...........|.|.|....:...|:      |:...|.:||      .:|.| .:..
  Fly     2 SLTKSSSRKDLTEQNQYQNQNENQNQPKSTTIV------KYEKSSCLFC------NEWFD-AQTF 53

  Fly   123 KGHLNACKHDATQCPNKCGAQIPRIMMTDHLQYTCTMRRTRCEFCQSEFSGAGLEEHNGSCGQEP 187
            ..||..|.....:|||.|.|.||||.|..||: .|.  |.:......:.....::..:....|..
  Fly    54 TEHLIHCGQVLEECPNGCQAFIPRIRMRSHLK-ECP--RNQHNLSNQQRMSVSMDRLDRQSDQRL 115

  Fly   188 VYCEAKCG--QRILRG--RMTLH-----------------------KSKDCAKRLRRCAHCQREF 225
            :..|...|  :.:|..  |..||                       |:.|..:|.......::.|
  Fly   116 LVIEQDVGTIRSVLNEEIRQRLHLITDVGNIRKQNQVVEDWTRETEKAMDDLRRQMEEETNRKAF 180

  Fly   226 SADTLPLHAAQCPRAPLACPQRCDAGPIPRGELEAHLRDECQSLAVSCS--------------FK 276
            :.:...|....|          ||.....:.::|:.| ||.|.|....|              .|
  Fly   181 AIEQNQLDVQYC----------CDITQSLKEQVESRL-DEAQKLVNQLSADVTYHQNQLNDNILK 234

  Fly   277 EAGCRFKGPRQMLE---------AHLESNAAAHLSLMVALSSRQG-------------------- 312
            .....|:..|...|         ..:..:....|.....::|:|.
  Fly   235 LEELIFENERLNREKFFQIEEFLQQINEDIKTKLGNSDYVTSKQATLDYEVKNVKNIVCETEERC 299

  Fly   313 --------QQIQMLKSAVSKLSI--------NYTGTLLWKITDWSAKMAEARGKDGLELVSPPFY 361
                    |.:|.:....:::::        |..|.|:|:|.|:|.|:.|::..|.: |.|..|.
  Fly   300 DKLDRALHQTMQNISDLETQMAMQQRIASVQNIRGHLIWRIKDYSKKLEESKQYDTI-LHSAMFS 363

  Fly   362 TSQYGYKLQASMFLNGNGPGENTHVSVYIKVLPGEYDALLKWPFSHSITFTLFEQ--GAQSGQGG 424
            ...:||.|:..::|||.|..:..::...:.||.||||.||.||........:.:|  .....:..
  Fly   364 NKAFGYALRLDIYLNGKGTWKGRNMIACLNVLSGEYDPLLAWPCRLQAEIIIRDQCTNVADAEDY 428

  Fly   425 VAESFVPDPTWENFQRPSNEPDQLGFGFPRFISHELLHSRPFIKGDTVFLRVKV 478
            |...||...:.:..|  ||:    .|..|    |:::.||.:::.|::|:.|:|
  Fly   429 VKTIFVRKKSDDFIQ--SNQ----YFHIP----HKVITSRNYLRNDSMFIEVRV 472

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Traf4	NP_477416.1	PLN03086	<109..206	CDD:178635	24/100 (24%)
		zf-TRAF	233..292	CDD:424248	14/81 (17%)
		MATH_TRAF4	331..479	CDD:239750	45/150 (30%)
Traf-like	NP_727976.1	zf-TRAF_2	<54..88	CDD:292587	15/34 (44%)
		MATH_TRAF_C	334..473	CDD:238168	45/150 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR10131
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	2.010