Protein Alignment Traf4 and Traf6

DIOPT Version :10

• Sequence 1: NP_477416.1
• Gene: Traf4 / 33638
• FlyBaseID: FBgn0026319
• Length: 486
• Species: Drosophila melanogaster
• Sequence 2: NP_511080.2
• Gene: Traf6 / 31746
• FlyBaseID: FBgn0265464
• Length: 475
• Species: Drosophila melanogaster
• Alignment Length: 414
• Identity: 90/414 - (21%)
• Similarity: 140/414 - (33%)
• Gaps: 130/414 - (31%)

  Fly   169 SEFSGAGLEEHNGS---CG------QEPVYCEAKCGQRILRGRMT--LHKSKDCAKRLRRCAHCQ 222
            |:.||...||...|   |.      .|||.  ..||.|..|..:|  :.|:..|      |....
  Fly    87 SDTSGEQEEELLDSRYECAICIDWLNEPVL--TSCGHRFCRSCLTAWMQKNNQC------CPMDN 143

  Fly   223 REFSA--DTLPLHAAQ---------CPRAPLACPQRCDAGPIPRGELEAHL-----RDECQSLAV 271
            :..||  |..|.:..:         ||.:.|.|  ...|.||   ||..||     |.:.:....
  Fly   144 KRLSAEHDIFPDNYTRREIEQLKRDCPNSSLGC--SVVASPI---ELHRHLPSCPYRRQQEPQEE 203

  Fly   272 SCSFKEAGCRFKG--PRQMLEAHLESNAAAHLSLM------------------------------ 304
            .|.|.:..|.|.|  ....||.||:::...|:.||
  Fly   204 KCPFAKIKCDFVGRPETNQLEEHLKADMPHHMQLMLQAFQQTAIATWQPHKPSTSGAAVENGHGQ 268

  Fly   305 -------------------------VALSSRQGQQIQMLKSAVSKLSI---------NYT-GTLL 334
                                     |.|..|..:|...|::...:|.:         .|: ||::
  Fly   269 QQLPPPPQYANGVDEQIVQTMYQRIVVLEQRTREQETRLENMQKQLRLARQQAPVDPRYSNGTIV 333

  Fly   335 WKITDWSAKMAEARGKDGLELVSPPFYTSQYGYKLQASMFLNGNGPGENTHV-SVYIKVLPGEYD 398
            |:|....|.:|..|.....::.|...|||.:|||..|.:.:....|    || |:::.::..|.|
  Fly   334 WRIEQLGALVARLRANANNQVYSHECYTSPHGYKFCARLNIQPRKP----HVLSLHVHLMQSEND 394

  Fly   399 ALLKWPFS--------HSITFTLFEQGAQSGQGGVAESFVPDPTWENFQRPSNEPDQLGFGFPRF 455
            ..|.|||.        |....||.:.          ::.:..|....|.:|.......||||..:
  Fly   395 YHLDWPFKGRIKLCMVHPADATLSQH----------DTIMTKPEILAFHKPREAISTRGFGFLEY 449

  Fly   456 ISHELLHSRPFIKGDTVFLRVKVD 479
            .:...:....|...|.:.::::::
  Fly   450 ANISNIIQLGFCADDRLLIKIEIN 473

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Traf4	NP_477416.1	PLN03086	<109..206	CDD:178635	15/47 (32%)
		zf-TRAF	233..292	CDD:280357	19/74 (26%)
		MATH_TRAF4	331..479	CDD:239750	37/156 (24%)
Traf6	NP_511080.2	mRING-HC-C3HC3D_LNX1-like	101..143	CDD:438299	12/49 (24%)
		Sina	169..>230	CDD:460824	21/65 (32%)
		MATH_TRAF6	330..473	CDD:239745	37/156 (24%)