DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Traf4 and Rnf151

DIOPT Version :9

Sequence 1:	NP_477416.1	Gene:	Traf4 / 33638	FlyBaseID:	FBgn0026319	Length:	486	Species:	Drosophila melanogaster
Sequence 2:	NP_001100457.1	Gene:	Rnf151 / 302977	RGDID:	1309302	Length:	238	Species:	Rattus norvegicus

Alignment Length:	143	Identity:	40/143 - (27%)
Similarity:	60/143 - (41%)	Gaps:	19/143 - (13%)

- Green bases have known domain annotations that are detailed below.

  Fly   104 VFCIHHKQGCKWSDELRKLKGHLNACKHDATQCPNK-CGAQIPRIMMTDHLQYTCTMRRTRCEF- 166
            |.|.:...||..:..|...|||.::|..:...|||: |.||:.|.::.:|.|:.....:.||..
  Rat    81 VKCKNAAAGCLVTCPLAHRKGHQDSCPFELMACPNEGCTAQVLRGVLDEHRQHCQQNGQQRCPLG 145

  Fly   167 CQSEFSGAGLEEHNGSCGQEPVYCEAKCG--QRILRGRMTLHKSKDCAKRL--------RRCAHC 221
            |.:..:....|:||  |     |.|.:..  ||..|.|..|.......:|:        |:.|..
  Rat   146 CGATLAALEGEQHN--C-----YRELRDAWVQRHERNRTLLLNLLGRVRRVYRTTNLIRRQLAQL 203

  Fly   222 QREFSADTLPLHA 234
            ......|||.|:|
  Rat   204 SNFLEDDTLLLNA 216

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Traf4	NP_477416.1	PLN03086	<109..206	CDD:178635	29/100 (29%)
		zf-TRAF	233..292	CDD:424248	1/2 (50%)
		MATH_TRAF4	331..479	CDD:239750
Rnf151	NP_001100457.1	RING_Ubox	20..58	CDD:418438
Rnf151	NP_001100457.1	Sina	83..>134	CDD:418524	17/50 (34%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D918518at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920