DRSC/TRiP Functional Genomics Resources

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Protein Alignment Traf4 and Traf6

DIOPT Version :10

Sequence 1:NP_477416.1 Gene:Traf4 / 33638 FlyBaseID:FBgn0026319 Length:486 Species:Drosophila melanogaster
Sequence 2:XP_061497130.1 Gene:Traf6 / 1272949 VectorBaseID:AGAMI1_001120 Length:381 Species:Anopheles gambiae


Alignment Length:413 Identity:86/413 - (20%)
Similarity:142/413 - (34%) Gaps:133/413 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 QCP-----------NKCGAQIPRIMMTDHLQYTCTMRRTRCEFCQSEFSGAGLEEHNGSC--GQE 186
            :||           .|||.:..|..:||                       .|.|.|.:|  ..|
Mosquito    32 ECPICYCWLNEPILTKCGHRFCRKCITD-----------------------WLNEKNSNCPLDNE 73

  Fly   187 PVYCEAKCGQRILRGRMTLHK----SKDCAKRLRRCAHCQREFSADTLPLHAAQCP----RAPLA 243
            |:  :.||.  |.....|..:    .|.|...:|.|.   .:.|...:..|..|||    |....
Mosquito    74 PL--DIKCD--IFPDNCTRREISQIKKPCPNSMRGCG---EQLSPTDIDTHLRQCPFSMSRQSQP 131

  Fly   244 CPQRCDAGPIPRGELEAHLRDECQSLAVSCSFKEAGCRFKGPRQ-MLEAHLESNAAAHLSLMV-- 305
            ||                             |....|:|..|.: .:.||:.|:...||.|::  
Mosquito   132 CP-----------------------------FARVKCKFVAPDEAAMSAHIASDCQQHLQLLLET 167

  Fly   306 --------------------ALSSRQ------------GQQIQMLKSAVSKLSINYT-------- 330
                                .:|:.:            .|::.:|...:||..|..|        
Mosquito   168 YTGSNDRYKFWDPPAKNSVPEMSTNELVRSMYERIVILEQEVHILGIKLSKQEIQLTKLNQEVDP 232

  Fly   331 ----GTLLWKITDWSAKMAEARGKDGLELVSPPFYTSQYGYKLQASMFLNGNGPGENTHVSVYIK 391
                |.||||:.|:|.|:............|...|||.:|||..|.:.::   |.....:.:::.
Mosquito   233 RYSGGVLLWKLDDFSNKIESMVANSNCMFYSSEAYTSPHGYKFCARINVS---PRTKDSIGLHVH 294

  Fly   392 VLPGEYDALLKWPFSHSITFTLFEQGAQSGQGGVAESFVPDPTWENFQRPSNEPDQLGFGFPRFI 456
            ::..|.|..|:|||...|..||.  ..:|.:....::.:..|....|.||:.:....||||..|.
Mosquito   295 LMQSENDYHLEWPFKGRIKITLL--NVRSPELSQHDTIMSKPEILAFHRPNQDISPRGFGFLEFA 357

  Fly   457 SHELLHSRPFIKGDTVFLRVKVD 479
            ..:.:.:: |...:||.::::::
Mosquito   358 KIKDILAK-FADNNTVVIKIQMN 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Traf4NP_477416.1 PLN03086 <109..206 CDD:178635 18/83 (22%)
zf-TRAF 233..292 CDD:280357 11/63 (17%)
MATH_TRAF4 331..479 CDD:239750 39/147 (27%)
Traf6XP_061497130.1 None

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