Sequence 1: | NP_477416.1 | Gene: | Traf4 / 33638 | FlyBaseID: | FBgn0026319 | Length: | 486 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031747100.1 | Gene: | traf1 / 101734662 | XenbaseID: | XB-GENE-22069371 | Length: | 549 | Species: | Xenopus tropicalis |
Alignment Length: | 582 | Identity: | 135/582 - (23%) |
---|---|---|---|
Similarity: | 210/582 - (36%) | Gaps: | 225/582 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 77 NNNNMPITELEQIIYP------GPDPKHIMGSLVFCIHHKQGCKWSDELRK----LKGH--LNAC 129
Fly 130 -------KHDATQCPNKCGAQIPRIMMTDHLQYTCTMRRTRCEFCQSEFSGAGL----------- 176
Fly 177 --------------EEHNGSCGQEPVYCEAKCGQRILRGRMTLHKSKDCAKRLRRCAHCQREFSA 227
Fly 228 DTLPLHAAQCPRAPLACPQRCDAGPIPRGELEAHLRDE---------CQSLAVSCSFKEAGCRFK 283
Fly 284 GPRQMLEAHLESNAAAHLSLMVALSSR-------------------------QGQ---------- 313
Fly 314 --------------------------------QIQMLKSAVSKLS-------------------- 326
Fly 327 -------------------------------------INYTGTLLWKITDWSAKMAEARGKDGLE 354
Fly 355 LVSPPFYTSQYGYKLQASMFLNGNGPGENTHVSVYIKVLPGEYDALLKWPFSHSITFTLFEQGAQ 419
Fly 420 SGQGGVAESFVPDPTWENFQRPSNEPDQLGFGFPRFISHELLHS--RPFIKGDTVFLRVKVD 479 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Traf4 | NP_477416.1 | PLN03086 | <109..206 | CDD:178635 | 30/134 (22%) |
zf-TRAF | 233..292 | CDD:424248 | 13/67 (19%) | ||
MATH_TRAF4 | 331..479 | CDD:239750 | 60/149 (40%) | ||
traf1 | XP_031747100.1 | RING_Ubox | 38..79 | CDD:418438 | 13/55 (24%) |
RAD18 | 39..>214 | CDD:227719 | 44/216 (20%) | ||
TRAF_BIRC3_bd | 317..377 | CDD:406958 | 4/59 (7%) | ||
MATH | 400..546 | CDD:351761 | 60/149 (40%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D391991at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |