Protein Alignment Traf4 and traf2

DIOPT Version :9

• Sequence 1: NP_477416.1
• Gene: Traf4 / 33638
• FlyBaseID: FBgn0026319
• Length: 486
• Species: Drosophila melanogaster
• Sequence 2: XP_031746908.1
• Gene: traf2 / 100494415
• XenbaseID: XB-GENE-493460
• Length: 527
• Species: Xenopus tropicalis
• Alignment Length: 562
• Identity: 129/562 - (22%)
• Similarity: 204/562 - (36%)
• Gaps: 178/562 - (31%)

  Fly    56 SSSSTVSSSHSSSHSSPTPGNNNNNMPITELEQIIYPGPDPKHIMGSLVFCIHHKQGCKWSDELR 120
            ::::.||.|...|.....||.....:. |:|| :.|...|.|:::               ...|:
 Frog     2 AAAAAVSGSPQGSLDLNQPGFKKEILG-TKLE-VKYLCSDCKNLL---------------RRPLQ 49

  Fly   121 KLKGHLNACKHDATQC----PNKCGAQIPRIMMTDHLQYT------------------------- 156
            ...|| ..|.|...:.    |.||.|.|...:..|.:...
 Frog    50 AQCGH-RYCSHCLNKIISTGPQKCSACIQEGIYEDGVSLLESSTAFPDNAARREVESLPAICNNN 113

  Fly   157 -CTMRRTRCEFCQSEFSGAGLEEHNGSCGQEPVYCEAKCGQRILRGRMTLHKSKDCAKRLRRCAH 220
             |..|.|..|:      ..|   |.|.|......|.| |...|......||..::|.:|...|.:
 Frog   114 GCNWRGTIKEY------EVG---HEGKCPYLLAPCPA-CKTLIRAANRDLHSERECPERKLNCRY 168

  Fly   221 CQREFSADTLPLHAAQCPRAPLACPQRCDAGPIPRGELEAHLRDECQSLAVSCSFKEAGCRFKGP 285
            |:..|....:..|...||:.|:.| :.|....|||.:...|:: .|....|.|.:...||
 Frog   169 CKLSFYFPDIKAHDEICPKFPMTC-EGCGRKKIPREKFPDHVK-ICGRCKVPCRYAAVGC----- 226

  Fly   286 RQMLE-----AHLESNAAAH-----------------LSLMVALSSRQG---------------- 312
            .:|:|     .|...:.|.|                 ||:.:...|.||
 Frog   227 TEMVENDKCLEHENKSLAEHLAKVWDYIQHGRKEQNDLSVRMGSLSVQGSPAPPANAPPNNSAKV 291

  Fly   313 ----------------------------------------------QQIQMLKSAV--------- 322
                                                          ::::.|.:.|
 Frog   292 AEMLLKFDTLDKKNTTFENIVSVLNREVERSSHAAEELARQLRAAQEKVEALTTKVRQLERTLGQ 356

  Fly   323 --------------SKLSINYTGTLLWKITDWSAKMAEARGKDGLELVSPPFYTSQYGYKLQASM 373
                          |:|| .|.|..:|||:::..|..:|.......:.||||||::||||:...:
 Frog   357 KELIVAELETRMQESELS-TYDGVFIWKISEFGKKRQDAINGRCPAMFSPPFYTNKYGYKMCLRI 420

  Fly   374 FLNGNGPGENTHVSVYIKVLPGEYDALLKWPFSHSITFTLFEQGAQSGQGGVAESFVPDPTWENF 438
            :|||:|.|.|||:|::..|:.|..||||:|||:..:|..|.:   |:.:..|.::|.||.:..:|
 Frog   421 YLNGDGTGRNTHLSLFFVVMKGNNDALLRWPFNQKVTLMLLD---QNNREHVIDAFRPDVSSSSF 482

  Fly   439 QRPSNEPDQLGFGFPRFISHELLHSR-PFIKGDTVFLRVKVD 479
            |||.:|.: :..|.|.|.....|..: .:::.||:|::|.||
 Frog   483 QRPISEMN-IASGCPLFCQVSKLEGKNSYVRDDTIFVKVIVD 523

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Traf4	NP_477416.1	PLN03086	<109..206	CDD:178635	23/126 (18%)
		zf-TRAF	233..292	CDD:424248	17/63 (27%)
		MATH_TRAF4	331..479	CDD:239750	54/148 (36%)
traf2	XP_031746908.1	RING-HC_TRAF2	35..76	CDD:319553	12/56 (21%)
		zf-TRAF	181..238	CDD:280357	17/63 (27%)
		TRAF_BIRC3_bd	295..355	CDD:406958	2/59 (3%)
		MATH	362..523	CDD:351761	58/165 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D391991at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010