Sequence 1: | NP_477416.1 | Gene: | Traf4 / 33638 | FlyBaseID: | FBgn0026319 | Length: | 486 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_004914139.2 | Gene: | traf5 / 100491604 | XenbaseID: | XB-GENE-985638 | Length: | 555 | Species: | Xenopus tropicalis |
Alignment Length: | 508 | Identity: | 114/508 - (22%) |
---|---|---|---|
Similarity: | 182/508 - (35%) | Gaps: | 184/508 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 97 KHIMGSLVFCIHHKQGCKWSDELRKLKGHLNACKHDATQCPNK-CGAQIPRIMMTDHLQYTCTMR 160
Fly 161 RTRCEFCQSEFSGAGLEEHNGSCGQEPVYCEAKCGQRILRGRMTLHKSKDCAKRLRRCAHCQREF 225
Fly 226 SADTLPLHAAQCPRAPLACPQRCDAGPIPRGELEAHLRDECQSLAVSCSFKEAGCRFKGPRQMLE 290
Fly 291 AHLESNAAAHLSLMV-------------------------------------------------- 305
Fly 306 ALSSR-------------QGQQIQMLKSAVSKLSI------------------------------ 327
Fly 328 ----------------------------NYTGTLLWKITDWSAKMAEARGKDGLELVSPPFYTSQ 364
Fly 365 YGYKLQASMFLNGNGPGENTHVSVYIKVLPGEYDALLKWPFSHSITFTLFEQGAQSGQGGVAESF 429
Fly 430 VPDPTWENFQRPSNEPDQLGFGFPRFISHELLHSRP---FIKGDTVFLRVKVD 479 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Traf4 | NP_477416.1 | PLN03086 | <109..206 | CDD:178635 | 22/97 (23%) |
zf-TRAF | 233..292 | CDD:424248 | 19/58 (33%) | ||
MATH_TRAF4 | 331..479 | CDD:239750 | 56/150 (37%) | ||
traf5 | XP_004914139.2 | mRING-HC-C3HC3D_TRAF5 | 42..84 | CDD:319556 | |
zf-TRAF | 127..182 | CDD:424248 | 16/54 (30%) | ||
zf-TRAF | 187..240 | CDD:424248 | 21/101 (21%) | ||
MATH | 400..548 | CDD:351761 | 56/150 (37%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG48494 | |
OrthoDB | 1 | 1.010 | - | - | D391991at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.930 |