DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atet and PDR12

DIOPT Version :9

Sequence 1:NP_001097079.1 Gene:Atet / 33636 FlyBaseID:FBgn0020762 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_015267.1 Gene:PDR12 / 856049 SGDID:S000005979 Length:1511 Species:Saccharomyces cerevisiae


Alignment Length:886 Identity:202/886 - (22%)
Similarity:319/886 - (36%) Gaps:302/886 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 VLYTSGNM-SLSTLSTGSGNPNPNPNASTNSRQEPVPLLSQLKLTNDLKQNSHGSQNNLCNGGLG 106
            :||..|:| .|.|         .|.:|.|.||:|.:..|                     ||   
Yeast   796 LLYKRGHMPELGT---------ENADARTASREEMMEAL---------------------NG--- 827

  Fly   107 SNNHALAPKVANNSGGSPNGQKKGTIALSHLPQRPPVDIEFCDISYSVTDSHRRGFKTILKSVSG 171
             .|..|...:|          :|.....:||....|.|               ...:.:|..|.|
Yeast   828 -PNVDLEKVIA----------EKDVFTWNHLDYTIPYD---------------GATRKLLSDVFG 866

  Fly   172 KFRNGEITAIMGPSGAGKSTLMNILA-GYKTAQLSGSVLINSKERNLRRFRKLSC-YIMQDDVLI 234
            ..:.|::||:||.|||||:||:|:|| ......::|.:|:|:|.  |......|| |:.|.|..:
Yeast   867 YVKPGKMTALMGESGAGKTTLLNVLAQRINMGVITGDMLVNAKP--LPASFNRSCGYVAQADNHM 929

  Fly   235 ANLTVREAMMVAANLKLGKNMISYAKVVVVEEILETIGLKESVNTLTCNLSGG----QRKRLSIA 295
            |.|:|||::..||.|:...::....|...||:|:..:|::.....|......|    |||:|||.
Yeast   930 AELSVRESLRFAAELRQQSSVPLEEKYEYVEKIITLLGMQNYAEALVGKTGRGLNVEQRKKLSIG 994

  Fly   296 LELVNNPP-VMFFDEPTSGLDSSTCFQLISLLRSLARGGRTIVCTIHQPSARLFEKFDHLYLLAQ 359
            :|||..|. ::|.|||||||||.:.:.::..:|:||..|::|:||||||||.|||:||.|.||.:
Yeast   995 VELVAKPSLLLFLDEPTSGLDSQSAWSIVQFMRALADSGQSILCTIHQPSATLFEQFDRLLLLKK 1059

  Fly   360 -GQCVYEGRV----KGLVPYLS-SLGYECPSYHNPADYVLEVASGEYGDAVPKLVDAVKSGACKK 418
             |:.||.|.:    :.|:.|.. ..|.:|....|||:|:|               :.:.:||...
Yeast  1060 GGKMVYFGDIGPNSETLLKYFERQSGMKCGVSENPAEYIL---------------NCIGAGATAS 1109

  Fly   419 YAHKDYVLTLAQKGCNNDIIKGSGSGAENAMAILTLEDEKPPLEDRQLEPSIPVDDPAELKPPKL 483
            .....:.|.||...|              |.|...:|:....|..|.:.     ||      |:|
Yeast  1110 VNSDWHDLWLASPEC--------------AAARAEVEELHRTLPGRAVN-----DD------PEL 1149

  Fly   484 ETQQSQNSDCSVVNMPTNAVDDSCSFSSSKGTQNAVGGSGSGGPSAVVGCM---TSLLDSHESVV 545
            .|:                      |::|..||              :.|:   |:|        
Yeast  1150 ATR----------------------FAASYMTQ--------------IKCVLRRTAL-------- 1170

  Fly   546 TLPNKTGFPTSGWTQFWILLKRSFRTILRDKMLTHMRLFSHVIVGAIIGMIYYDVGNEASKIMSN 610
                          |||           |..:....:.|..|.....:|:.|..|.:.....:..
Yeast  1171 --------------QFW-----------RSPVYIRAKFFECVACALFVGLSYVGVNHSVGGAIEA 1210

  Fly   611 AGCIFFVSLFTTFTAMMPTILTFPTE----------------MSVFVREHL---NYWYSLKAF-- 654
            ...||.:.|..  .||:..:..|..:                .||.:..|.   |:|.:|..|  
Yeast  1211 FSSIFMLLLIA--LAMINQLHVFAYDSRELYEVREAASNTFHWSVLLLCHAAVENFWSTLCQFMC 1273

  Fly   655 --------YFAKTIADMPFQIVFSSVYVLV--VYYLTSQPMELERVSMFVLICVLNSLVAQSLGL 709
                    .|:...:...|...|   |||:  :|::|        ..:::|....:...|..:..
Yeast  1274 FICYYWPAQFSGRASHAGFFFFF---YVLIFPLYFVT--------YGLWILYMSPDVPSASMINS 1327

  Fly   710 LIGAGMNIETGVFLGPVTTIPTILFSGFFVNFDTIPGYLQWVTY-VSYVRYGFEGAMVAIYGMDR 773
            .:.|.|                :||.|.....:.:|.:.:.:.| ||...|..:..:..:  :..
Yeast  1328 NLFAAM----------------LLFCGILQPREKMPAFWRRLMYNVSPFTYVVQALVTPL--VHN 1374

  Fly   774 AKMQCNQ--------------------------------------MYCHYRVPKKFLEEMSM--- 797
            .|:.||.                                      .||.|.|..:.:.:.::   
Yeast  1375 KKVVCNPHEYNIMDPPSGKTCGEFLSTYMDNNTGYLVNPTATENCQYCPYTVQDQVVAKYNVKWD 1439

  Fly   798 ----DNALFWVDAVALIGIFFALRIIAYFVLR---WKLHMI 831
                :....|    |.|....|..:|.|:|:|   |.|..:
Yeast  1440 HRWRNFGFMW----AYICFNIAAMLICYYVVRVKVWSLKSV 1476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtetNP_001097079.1 3a01204 137..825 CDD:273361 179/780 (23%)
ABCG_EPDR 142..366 CDD:213180 89/231 (39%)
ABC2_membrane 564..767 CDD:279410 39/234 (17%)
PDR12NP_015267.1 3a01205 89..1468 CDD:273362 199/876 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341520
Domainoid 1 1.000 102 1.000 Domainoid score I1517
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
TreeFam 00.000 Not matched by this tool.
32.930

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