DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atet and PDR10

DIOPT Version :9

Sequence 1:NP_001097079.1 Gene:Atet / 33636 FlyBaseID:FBgn0020762 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_014973.1 Gene:PDR10 / 854506 SGDID:S000005855 Length:1564 Species:Saccharomyces cerevisiae


Alignment Length:836 Identity:187/836 - (22%)
Similarity:329/836 - (39%) Gaps:206/836 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 TNSRQEPVPLLSQLKLTNDLKQNSHGSQNN-----------LCNGGLGSNNHALAPKVANNSGGS 123
            :..:::..|.||......|::.|::.|..:           :.|....:..|..:|  ::::..|
Yeast   843 SEKKKKNQPTLSTSDAEKDVEMNNNSSATDSRFLRDSDAAIMGNDKTVAKEHYSSP--SSSASQS 905

  Fly   124 PNGQKKGTIALSHLPQRPPVDIEFCDISYSVTDSHRRGFKTILKSVSGKFRNGEITAIMGPSGAG 188
            .:..|...|.||    :......:.::.|.:  ..:.|.:.||.:|.|..:.|.:||::|.||||
Yeast   906 NSFSKSDDIELS----KSQAIFHWKNLCYDI--PIKNGKRRILDNVDGWVKPGTLTALIGASGAG 964

  Fly   189 KSTLMNILAGYKTAQL-SGSVLINSKERNLRRFRKLSCYIMQDDVLIANLTVREAMMVAANLKLG 252
            |:||::.||...|..| :|.|.::.:.|: :.|.:...|..|.|:.:...||||::..:|.|:..
Yeast   965 KTTLLDCLAERTTMGLITGDVFVDGRPRD-QSFPRSIGYCQQQDLHLKTATVRESLRFSAYLRQA 1028

  Fly   253 KNMISYAKVVVVEEILETIGLKESVNTLTC----NLSGGQRKRLSIALELVNNPPVM-FFDEPTS 312
            .::....|...|||::|.:.:|...:.:..    .|:..|||||:|.:||...|.:: |.|||||
Yeast  1029 DDVSIEEKDKYVEEVIEVLEMKLYADAIVGVPGEGLNVEQRKRLTIGVELAAKPKLLVFLDEPTS 1093

  Fly   313 GLDSSTCFQLISLLRSLARGGRTIVCTIHQPSARLFEKFDHLYLLAQ-GQCVYEGRV----KGLV 372
            ||||.|.:....|::.||..|:.|:||||||||.|.::||.|..|.: ||.||.|.:    |.::
Yeast  1094 GLDSQTAWSTCQLMKKLASRGQAILCTIHQPSALLMQEFDRLLFLQEGGQTVYFGELGKGCKTMI 1158

  Fly   373 PYLSSLG-YECPSYHNPADYVLEVASGEYGDAVPKLVDAVKSGACKKYAHKDYVLTLAQKGCNND 436
            .|..:.| ::||...|||:::||:.....|                .:|.:||            
Yeast  1159 NYFEAHGAHKCPPDANPAEWMLEIVGAAPG----------------THASQDY------------ 1195

  Fly   437 IIKGSGSGAENAMAILTLEDEKPPLEDRQLEPSIPVDDPAELKPPKLETQQSQNSDCSVVNMPTN 501
                        .||....:|.     |:::..:   |..|.:.|| .|:.|.|.:         
Yeast  1196 ------------FAIWRDSEEY-----REMQKEL---DWMERELPK-RTEGSSNEE--------- 1230

  Fly   502 AVDDSCSFSSSKGTQNAVGGSGSGGPSAVVGCMTSLLDSHESVVTLPNKTGFPTSGWTQFWILLK 566
                                                            :..|.||...|..::..
Yeast  1231 ------------------------------------------------QKEFATSTLYQIKLVSY 1247

  Fly   567 RSFRTILRDKMLTHMRLFSHVIVGAIIGMIYYDVGNEASKIMSNAGCIFFVSLFTTFTAMMPTIL 631
            |.|....|.......:.||.::....||..::........:.:....||.      ||.:...||
Yeast  1248 RLFHQYWRTPFYLWSKFFSTIVSELFIGFTFFKANTSLQGLQNQMLAIFM------FTVVFNPIL 1306

  Fly   632 -----TFPTEMSVF-VREHLNYWYSLKAFYFAKTIADMPFQIVFSSVYVLVVYY------LTSQP 684
                 .|..:..:: .||..:..:|.|||..::.:.::|:.::..::...|.||      ..|..
Yeast  1307 QQYLPLFVQQRELYEARERPSRTFSWKAFIVSQILVEIPWNLLAGTIAFFVYYYPVGFYRNASYA 1371

  Fly   685 MEL-ERVSMFVLICVLNSLVAQSLGLLIGAGMNI-ETGVFLGPVTTIPTILFSGFFVNFDTIPGY 747
            .:| ||.::|.|......:...|:|:|:.:.:.| |....|..:..|.::.|.|.....:.:|.:
Yeast  1372 NQLHERGALFWLFACAFYVYISSMGVLVISCIEIAENAANLASLFFIMSLSFCGVLATPNILPRF 1436

  Fly   748 LQWV--------TYV--SYVRYGFEGAMVAIYGMDRAK------MQCNQM--------------- 781
              |:        ||:  :.:..|...|.|.....:..|      |.|::.               
Yeast  1437 --WIFMYRVSPLTYLIDALLSVGLANASVVCSSNELLKIVPPSGMTCSEYMEPYMQSTGTGYLLD 1499

  Fly   782 --------YCHYRVPKKFLEEMSMDNALFWVDAVALIGIFFALRIIAY---FVLRW 826
                    :|.:.....:|..:|...:..|::    .|||.|..:..|   ..|.|
Yeast  1500 GSSETECHFCQFSSTNDYLATVSSSYSRRWMN----YGIFSAYIVFDYCAAIFLYW 1551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtetNP_001097079.1 3a01204 137..825 CDD:273361 171/755 (23%)
ABCG_EPDR 142..366 CDD:213180 83/230 (36%)
ABC2_membrane 564..767 CDD:279410 45/226 (20%)
PDR10NP_014973.1 3a01205 110..1556 CDD:273362 187/836 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341522
Domainoid 1 1.000 102 1.000 Domainoid score I1517
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
TreeFam 00.000 Not matched by this tool.
43.840

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