DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atet and PDR5

DIOPT Version :10

Sequence 1:NP_523471.2 Gene:Atet / 33636 FlyBaseID:FBgn0020762 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_014796.3 Gene:PDR5 / 854324 SGDID:S000005679 Length:1511 Species:Saccharomyces cerevisiae


Alignment Length:643 Identity:158/643 - (24%)
Similarity:278/643 - (43%) Gaps:143/643 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 KTILKSVSGKFRNGEITAIMGPSGAGKSTLMNILAGYKT-AQLSGSVLINSKERNLRRFRKLSCY 226
            :.||.:|.|..:.|.:||:||.|||||:||::.||...| ..::|.:|:|...|: :.|.:...|
Yeast   885 RRILNNVDGWVKPGTLTALMGASGAGKTTLLDCLAERVTMGVITGDILVNGIPRD-KSFPRSIGY 948

  Fly   227 IMQDDVLIANLTVREAMMVAANLKLGKNMISYAKVVVVEEILETIGLKESVNTLTC----NLSGG 287
            ..|.|:.:...||||::..:|.|:....:....|...|||:::.:.:::..:.:..    .|:..
Yeast   949 CQQQDLHLKTATVRESLRFSAYLRQPAEVSIEEKNRYVEEVIKILEMEKYADAVVGVAGEGLNVE 1013

  Fly   288 QRKRLSIALELVNNPPVM-FFDEPTSGLDSSTCFQLISLLRSLARGGRTIVCTIHQPSARLFEKF 351
            |||||:|.:||...|.:: |.|||||||||.|.:.:..|::.||..|:.|:||||||||.|.::|
Yeast  1014 QRKRLTIGVELTAKPKLLVFLDEPTSGLDSQTAWSICQLMKKLANHGQAILCTIHQPSAILMQEF 1078

  Fly   352 DHLYLLAQ-GQCVYEGRV----KGLVPYLSSLG-YECPSYHNPADYVLEVASGEYGDAVPKLVDA 410
            |.|..:.: |:.||.|.:    |.::.|..|.| ::||:..|||:::|||.....|         
Yeast  1079 DRLLFMQRGGKTVYFGDLGEGCKTMIDYFESHGAHKCPADANPAEWMLEVVGAAPG--------- 1134

  Fly   411 VKSGACKKYAHKDYVLTLAQKGCNNDIIKGSGSGAENAMAILTLEDEKPPLEDRQLEPSIPVDDP 475
                   .:|::||.          ::.:.|.                   |.|.::..:   |.
Yeast  1135 -------SHANQDYY----------EVWRNSE-------------------EYRAVQSEL---DW 1160

  Fly   476 AELKPPKLETQQSQNSDCSVVNMPTNAVDDSCSFSSSKGTQNAVGGSGSGGPSAVVGCMTSLLDS 540
            .|.:.||                                                .|.:|:..|.
Yeast  1161 MERELPK------------------------------------------------KGSITAAEDK 1177

  Fly   541 HESVVTLPNKTGFPTSG-WTQFWILLKRSFRTILRDKMLTHMRLFSHVIVGAIIGMIYYDVGNEA 604
            ||...::..:|...:.. :.|:|    ||...:....:||   :|:.:    .||..::..|...
Yeast  1178 HEFSQSIIYQTKLVSIRLFQQYW----RSPDYLWSKFILT---IFNQL----FIGFTFFKAGTSL 1231

  Fly   605 SKIMSNAGCIFFVSLFTTFTAMMPTIL-----TFPTEMSVF-VREHLNYWYSLKAFYFAKTIADM 663
            ..:.:....:|.      ||.:...||     :|..:..:: .||..:..:|..:|.||:...::
Yeast  1232 QGLQNQMLAVFM------FTVIFNPILQQYLPSFVQQRDLYEARERPSRTFSWISFIFAQIFVEV 1290

  Fly   664 PFQIVFSSVYVLVVYY------LTSQPMEL-ERVSMFVLICVLNSLVAQSLGLL-IGAGMNIETG 720
            |:.|:..::...:.||      ..|...:| ||.::|.|......:...|:||| |......|:.
Yeast  1291 PWNILAGTIAYFIYYYPIGFYSNASAAGQLHERGALFWLFSCAFYVYVGSMGLLVISFNQVAESA 1355

  Fly   721 VFLGPVTTIPTILFSGFFVNFDTIPGYLQWVTYVSYVRYGFEGAMVAIYGMDRAKMQC 778
            ..|..:....::.|.|.......:|.:..::..||.:.| |..|::|: |:....::|
Yeast  1356 ANLASLLFTMSLSFCGVMTTPSAMPRFWIFMYRVSPLTY-FIQALLAV-GVANVDVKC 1411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtetNP_523471.2 3a01204 137..825 CDD:273361 158/643 (25%)
PDR5NP_014796.3 ABC_trans_N 46..152 CDD:464194
3a01205 100..1503 CDD:273362 158/643 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.