DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atet and PDR5

DIOPT Version :9

Sequence 1:NP_001097079.1 Gene:Atet / 33636 FlyBaseID:FBgn0020762 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_014796.3 Gene:PDR5 / 854324 SGDID:S000005679 Length:1511 Species:Saccharomyces cerevisiae


Alignment Length:643 Identity:158/643 - (24%)
Similarity:278/643 - (43%) Gaps:143/643 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 KTILKSVSGKFRNGEITAIMGPSGAGKSTLMNILAGYKT-AQLSGSVLINSKERNLRRFRKLSCY 226
            :.||.:|.|..:.|.:||:||.|||||:||::.||...| ..::|.:|:|...|: :.|.:...|
Yeast   885 RRILNNVDGWVKPGTLTALMGASGAGKTTLLDCLAERVTMGVITGDILVNGIPRD-KSFPRSIGY 948

  Fly   227 IMQDDVLIANLTVREAMMVAANLKLGKNMISYAKVVVVEEILETIGLKESVNTLTC----NLSGG 287
            ..|.|:.:...||||::..:|.|:....:....|...|||:::.:.:::..:.:..    .|:..
Yeast   949 CQQQDLHLKTATVRESLRFSAYLRQPAEVSIEEKNRYVEEVIKILEMEKYADAVVGVAGEGLNVE 1013

  Fly   288 QRKRLSIALELVNNPPVM-FFDEPTSGLDSSTCFQLISLLRSLARGGRTIVCTIHQPSARLFEKF 351
            |||||:|.:||...|.:: |.|||||||||.|.:.:..|::.||..|:.|:||||||||.|.::|
Yeast  1014 QRKRLTIGVELTAKPKLLVFLDEPTSGLDSQTAWSICQLMKKLANHGQAILCTIHQPSAILMQEF 1078

  Fly   352 DHLYLLAQ-GQCVYEGRV----KGLVPYLSSLG-YECPSYHNPADYVLEVASGEYGDAVPKLVDA 410
            |.|..:.: |:.||.|.:    |.::.|..|.| ::||:..|||:::|||.....|         
Yeast  1079 DRLLFMQRGGKTVYFGDLGEGCKTMIDYFESHGAHKCPADANPAEWMLEVVGAAPG--------- 1134

  Fly   411 VKSGACKKYAHKDYVLTLAQKGCNNDIIKGSGSGAENAMAILTLEDEKPPLEDRQLEPSIPVDDP 475
                   .:|::||.          ::.:.|.                   |.|.::..:   |.
Yeast  1135 -------SHANQDYY----------EVWRNSE-------------------EYRAVQSEL---DW 1160

  Fly   476 AELKPPKLETQQSQNSDCSVVNMPTNAVDDSCSFSSSKGTQNAVGGSGSGGPSAVVGCMTSLLDS 540
            .|.:.||                                                .|.:|:..|.
Yeast  1161 MERELPK------------------------------------------------KGSITAAEDK 1177

  Fly   541 HESVVTLPNKTGFPTSG-WTQFWILLKRSFRTILRDKMLTHMRLFSHVIVGAIIGMIYYDVGNEA 604
            ||...::..:|...:.. :.|:|    ||...:....:||   :|:.:    .||..::..|...
Yeast  1178 HEFSQSIIYQTKLVSIRLFQQYW----RSPDYLWSKFILT---IFNQL----FIGFTFFKAGTSL 1231

  Fly   605 SKIMSNAGCIFFVSLFTTFTAMMPTIL-----TFPTEMSVF-VREHLNYWYSLKAFYFAKTIADM 663
            ..:.:....:|.      ||.:...||     :|..:..:: .||..:..:|..:|.||:...::
Yeast  1232 QGLQNQMLAVFM------FTVIFNPILQQYLPSFVQQRDLYEARERPSRTFSWISFIFAQIFVEV 1290

  Fly   664 PFQIVFSSVYVLVVYY------LTSQPMEL-ERVSMFVLICVLNSLVAQSLGLL-IGAGMNIETG 720
            |:.|:..::...:.||      ..|...:| ||.::|.|......:...|:||| |......|:.
Yeast  1291 PWNILAGTIAYFIYYYPIGFYSNASAAGQLHERGALFWLFSCAFYVYVGSMGLLVISFNQVAESA 1355

  Fly   721 VFLGPVTTIPTILFSGFFVNFDTIPGYLQWVTYVSYVRYGFEGAMVAIYGMDRAKMQC 778
            ..|..:....::.|.|.......:|.:..::..||.:.| |..|::|: |:....::|
Yeast  1356 ANLASLLFTMSLSFCGVMTTPSAMPRFWIFMYRVSPLTY-FIQALLAV-GVANVDVKC 1411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtetNP_001097079.1 3a01204 137..825 CDD:273361 158/643 (25%)
ABCG_EPDR 142..366 CDD:213180 78/209 (37%)
ABC2_membrane 564..767 CDD:279410 45/216 (21%)
PDR5NP_014796.3 ABC_trans_N 46..152 CDD:405234
3a01205 100..1503 CDD:273362 158/643 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341521
Domainoid 1 1.000 102 1.000 Domainoid score I1517
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
TreeFam 00.000 Not matched by this tool.
32.930

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