DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atet and ABCG12

DIOPT Version :9

Sequence 1:NP_001097079.1 Gene:Atet / 33636 FlyBaseID:FBgn0020762 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_175561.1 Gene:ABCG12 / 841575 AraportID:AT1G51500 Length:687 Species:Arabidopsis thaliana


Alignment Length:732 Identity:193/732 - (26%)
Similarity:336/732 - (45%) Gaps:153/732 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 QRPPVDIE--------FCDISYSVTDSHRRGFKTILKSVSGKFRNGEITAIMGPSGAGKSTLMNI 195
            :|||...|        :.|::..:.:......:.:|..::|....|.|.|||||||:|||||::.
plant    10 RRPPPPAEIGRGAYLAWEDLTVVIPNFSGGPTRRLLDGLNGHAEPGRIMAIMGPSGSGKSTLLDS 74

  Fly   196 LAG--YKTAQLSGSVLINSKERNLRRFRKLSCYIMQDDVLIANLTVREAMMVAANLKLGKNMISY 258
            |||  .:...::|::|:|.|:..|.  ..|..|:.|:|:|:..|||||.:..:|:|:|..::...
plant    75 LAGRLARNVIMTGNLLLNGKKARLD--YGLVAYVTQEDILMGTLTVRETITYSAHLRLSSDLTKE 137

  Fly   259 AKVVVVEEILETIGLKESVNTLTCN-----LSGGQRKRLSIALELVNNPPVMFFDEPTSGLDSST 318
            ....:||..:..:||::..:.:..|     :|||:|||:|:|||::..|.::|.|||||||||::
plant   138 EVNDIVEGTIIELGLQDCADRVIGNWHSRGVSGGERKRVSVALEILTRPQILFLDEPTSGLDSAS 202

  Fly   319 CFQLISLLRSLAR-GGRTIVCTIHQPSARLFEKFDHLYLLAQGQCVYEGRVKGLVPYLSSLGYEC 382
            .|.:|..||::|| ||||:|.:|||||:.:|..||.|:||:.|:.||.|..|..|.:.:..|:.|
plant   203 AFFVIQALRNIARDGGRTVVSSIHQPSSEVFALFDDLFLLSSGETVYFGESKFAVEFFAEAGFPC 267

  Fly   383 PSYHNPADYVLEVASGEYGDAVPKLVDAVKSGACKKYAHKDYVLTLAQKGCNNDIIKGSGSGAEN 447
            |...||:|:.|...:.::        |.|.:                       .:|||      
plant   268 PKKRNPSDHFLRCINSDF--------DTVTA-----------------------TLKGS------ 295

  Fly   448 AMAILTLEDEKPPLEDRQLEPSIPVDDP-AELKPPKLETQQSQNSDCSVVNMPTNAVDDSCSFSS 511
                            :::..:....|| ..|...:::.:..:|...||.               
plant   296 ----------------QRIRETPATSDPLMNLATSEIKARLVENYRRSVY--------------- 329

  Fly   512 SKGTQNAVGGSGSGGPSAVVGCMTSLLDSHESVVTLPNKTGFPTSGWTQFWILLKRSFRTILRDK 576
            :|..::.:....|             ::.|..:..   :.|...:.:.|...|.||||..:.||.
plant   330 AKSAKSRIRELAS-------------IEGHHGMEV---RKGSEATWFKQLRTLTKRSFVNMCRDI 378

  Fly   577 MLTHMRLFSHVIVGAIIGMIYYDVGNEASKIMSNAGCIFFVSLFTTFTAM--MPTILTFPTEMSV 639
            .....|:..:::|...:|.|:||||:..:.|::...|..|::.|.||.::  .|   :|..||.|
plant   379 GYYWSRIVIYIVVSFCVGTIFYDVGHSYTSILARVSCGGFITGFMTFMSIGGFP---SFIEEMKV 440

  Fly   640 FVREHLNYWYSLKAFYFAKTIADMPFQIVFSSVYVLVVYYLTSQPMELERVSMFVL-----ICVL 699
            |.:|.|:.:|.:..:..:..::..||.:..:.:...:.|.:......:...:.|.|     :.|:
plant   441 FYKERLSGYYGVSVYIISNYVSSFPFLVAIALITGSITYNMVKFRPGVSHWAFFCLNIFFSVSVI 505

  Fly   700 NSL--VAQSL------GLLIGAGMNIETGVFLGPVTTIPTILFSGFFVNFDTIPGYLQW---VTY 753
            .||  |..||      ||:.|||:   .|:.:         :.||||.....:|... |   :::
plant   506 ESLMMVVASLVPNFLMGLITGAGI---IGIIM---------MTSGFFRLLPDLPKVF-WRYPISF 557

  Fly   754 VSYVRYGFEGAMVAIYGMDRAKMQCNQMYCHYRVPKKFLEEMSMDNALF--------WVDAVALI 810
            :||..:..:||    |..|...::.:.|:.  ..||...|::.  |.:|        |.|..|::
plant   558 MSYGSWAIQGA----YKNDFLGLEFDPMFA--GEPKMTGEQVI--NKIFGVQVTHSKWWDLSAIV 614

  Fly   811 GIFFALRIIAYFVLRWK 827
            .|....||:.:.||:.|
plant   615 LILVCYRILFFIVLKLK 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtetNP_001097079.1 3a01204 137..825 CDD:273361 191/728 (26%)
ABCG_EPDR 142..366 CDD:213180 91/239 (38%)
ABC2_membrane 564..767 CDD:279410 57/220 (26%)
ABCG12NP_175561.1 3a01204 40..635 CDD:273361 188/702 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.810

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