DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atet and ABCG28

DIOPT Version :10

Sequence 1:NP_523471.2 Gene:Atet / 33636 FlyBaseID:FBgn0020762 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_200882.4 Gene:ABCG28 / 836195 AraportID:AT5G60740 Length:1109 Species:Arabidopsis thaliana


Alignment Length:788 Identity:198/788 - (25%)
Similarity:327/788 - (41%) Gaps:187/788 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 LSTLSTGSGNPNPNPNASTNSRQEPVPLLSQLKLT---NDLKQNSHGSQN-NLCNGGLGSNNHAL 112
            ||....||....| |...::|..:......:.|||   :|::||....:. ||..|......||.
plant   382 LSQAKPGSDAALP-PMLGSSSDTKKGKKKEKNKLTEMLHDIEQNPEDPEGFNLEIGDKNIKKHAP 445

  Fly   113 APKVANNSG-------GSPNGQK-----------KGTIALSH---LPQRPPVDIEFCDISYSVTD 156
            ..|..:...       |....:|           .|.|::::   :.:||.:::.|.|:|.::..
plant   446 KGKALHTQSQMFRYAYGQIEKEKAMQEQNKNLTFSGVISMANDIDIRKRPMIEVAFKDLSITLKG 510

  Fly   157 SHRRGFKTILKSVSGKFRNGEITAIMGPSGAGKSTLMNILAGYKT-AQLSGSVLINSKERNLRRF 220
            .:    |.:::.|:||...|.::|:||||||||:|.:..|.|... ..::|.:|:|.|..:::.:
plant   511 KN----KHLMRCVTGKLSPGRVSAVMGPSGAGKTTFLTALTGKAPGCIMTGMILVNGKVESIQSY 571

  Fly   221 RKLSCYIMQDDVLIANLTVREAMMVAANLKLGKNMISYAKVVVVEEILETIGLKESVNTLT---- 281
            :|:..::.|||::..||||.|.:..:|..:|..::....||:|||.::|::||:...::|.    
plant   572 KKIIGFVPQDDIVHGNLTVEENLWFSARCRLPADLPKPEKVLVVERVIESLGLQHVRDSLVGTVE 636

  Fly   282 -CNLSGGQRKRLSIALELVNNPPVMFFDEPTSGLDSSTCFQLISLLRSLARGGRTIVCTIHQPSA 345
             ..:|||||||:::.||:|..|.::..||||||||||:...|:..||..|..|..|...:||||.
plant   637 KRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVVHQPSY 701

  Fly   346 RLFEKFDHLYLLAQGQCV-YEGRVKGLVPYLSSLGYECPSYHNPADYVLEVASGEYGDAVPKLVD 409
            .||..||.|.|||:|..: |:|.||.:..|.||||...|...||.||.:::..|       .|..
plant   702 TLFRMFDDLILLAKGGLICYQGPVKKVEEYFSSLGIVVPERVNPPDYYIDILEG-------ILKP 759

  Fly   410 AVKSGACKK------YAHKDYVLTLAQKGCNNDIIKGSGSGAENAMAILTLEDEKPPLEDRQLEP 468
            :..||...|      ..|..|.:.:       |::|                             
plant   760 STSSGVTYKQLPVRWMLHNGYPVPM-------DMLK----------------------------- 788

  Fly   469 SIPVDDPAELKPPKLETQQSQNSDCSVVNMPTNAVDDSCSFSSSKGTQNAVGGSGSGGPSAVVGC 533
                                     |:..|.          ||:.|..:|.|||..|   :||| 
plant   789 -------------------------SIEGMA----------SSASGENSAHGGSAHG---SVVG- 814

  Fly   534 MTSLLDSHESVV----------------TLPNKTGFPTSG----------WTQFWILLKRSFRTI 572
                 |...|..                .|.|  .|.:||          :.|:...|.|..:..
plant   815 -----DDGTSFAGEFWQDVKANVEIKKDNLQN--NFSSSGDLSEREVPGVYQQYRYFLGRLGKQR 872

  Fly   573 LRDKMLTHMRLFSHVIVGAIIGMIYYDVGNEASKIMSNAGCIFFVSLFTTFTAMMPTILTFPTEM 637
            ||:.....:.....::.|..:|.:        :|:....    |.::..|:|.:..::|...|.:
plant   873 LREARTLAVDYLILLLAGICLGTL--------AKVSDET----FGAMGYTYTVIAVSLLCKITAL 925

  Fly   638 SVFVREHLNYW------YSLKAFYFAKTIADMPFQIVFSSVYVLVVYYLTSQPMELERVSMFVLI 696
            ..|..:.|:||      .|..|::.||...| .|..:...:..|.::|..:.|......:..|||
plant   926 RSFSLDKLHYWRESRAGMSSLAYFLAKDTVD-HFNTIVKPLVYLSMFYFFNNPRSTVTDNYVVLI 989

  Fly   697 CVLNSL--VAQSLGLLIGAGMNIETGVFLGPVTTIPTILFSGFFVNFDTIPGYLQWVTYVSYVRY 759
            |::..:  :|.:|.:|...|......|.|..|.|:  |..|   .|.:.|   :..::.:.|.|:
plant   990 CLVYCVTGIAYTLAILFEPGPAQLWSVLLPVVLTL--IATS---TNDNKI---VDSISELCYTRW 1046

  Fly   760 GFEGAMVA 767
            ..|..:|:
plant  1047 ALEAFVVS 1054

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtetNP_523471.2 3a01204 137..825 CDD:273361 175/678 (26%)
ABCG28NP_200882.4 ABCG_EPDR 496..723 CDD:213180 85/230 (37%)
ABC2_membrane_7 697..1109 CDD:465963 102/468 (22%)

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