DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atet and ABCG4

DIOPT Version :10

Sequence 1:NP_523471.2 Gene:Atet / 33636 FlyBaseID:FBgn0020762 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_194305.1 Gene:ABCG4 / 828680 AraportID:AT4G25750 Length:577 Species:Arabidopsis thaliana


Alignment Length:679 Identity:172/679 - (25%)
Similarity:298/679 - (43%) Gaps:159/679 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 ILKSVSGKFRNGEITAIMGPSGAGKSTLMNILAGYKTAQLSGSVLINSKERNLRRFRKLSCYIMQ 229
            ||::::......:|.||:||||||||||::|||. :|:..|||:|:||...|...:||:|.|:.|
plant    30 ILRNITLTSHPSQILAIIGPSGAGKSTLLDILAA-RTSPTSGSILLNSVLINPSSYRKISSYVPQ 93

  Fly   230 DDVLIANLTVREAMMVAANLKLGKNMISYAKVVVVEEILETIGLKESVNT-LTCNLSGGQRKRLS 293
            .|.....|||.|....:|:|.|.||:...:.||.  .:|:.:.|....:| |...||||:|:|:|
plant    94 HDTFFPLLTVSETFTFSASLLLPKNLSKVSSVVA--SLLKELNLTHLAHTRLGQGLSGGERRRVS 156

  Fly   294 IALELVNNPPVMFFDEPTSGLDSSTCFQLISLLRSLARG-GRTIVCTIHQPSARLFEKFDHLYLL 357
            |.|.|:::|.|:..|||||||||.:.|.::.:|:|:|.. .|.::.:|||||.::....|.:.||
plant   157 IGLSLLHDPEVLLLDEPTSGLDSKSAFDVVQILKSIATSRERIVILSIHQPSFKILSLIDRVLLL 221

  Fly   358 AQGQCVYEGRVKGLVPYLSSLGYECPSYHNPADYVLEVASGEYGDAVPKLVDAVKSGACKKYAHK 422
            ::|..||.||:..|..:|.|.|:..||..|..:|.:|:                           
plant   222 SKGTIVYHGRLDLLEAFLLSKGFTVPSQLNSLEYAMEI--------------------------- 259

  Fly   423 DYVLTLAQKGCNNDIIKGSGSGAENAMAILTLEDEKPPLEDRQLEPSIPVDDPAELKPPKLETQQ 487
                                           |::.:.|.|:..:  ::|...|...|        
plant   260 -------------------------------LQNIRDPYENANI--ALPDHCPESKK-------- 283

  Fly   488 SQNSDCSVVNMPTNAVDDSCSFSSSKGTQNAVGGSGSGGPSAVVGCMTSLLDSHESVVTLPNKTG 552
             ||...|:|.           :.||:.|:                  .|||.|            
plant   284 -QNQKQSIVR-----------YKSSRITE------------------ISLLSS------------ 306

  Fly   553 FPTSGWTQFWILLKRSFRTILRDKMLTHMRLFSHVIVGAIIGMIYYDVGNEASKIMSNAGCIFFV 617
                   :||.::.|:     |..:||:  :...::||.::|.||.::|.....|....| :|..
plant   307 -------RFWKIIYRT-----RQLLLTN--ILESLVVGLVLGTIYLNIGTGKEGIRKRFG-LFAF 356

  Fly   618 SLFTTFTAMMPTILTFPTEMSVFVREHLNYWYSLKAFYFAKTIADMPFQIVFSSVYVLVVYYLTS 682
            :|....::...|:..|..|..:.:||..:..|.|.:...|.|:..:|:.::.:.:|.:.:|:|..
plant   357 TLTFLLSSTTQTLPIFIDERPILLRETSSGLYRLSSHILANTLVFLPYLLLIAIIYSVSLYFLVG 421

  Fly   683 QPMELERVSMFVLICVLNSLVAQSLGLLIGA-GMNIETGVFLGPVTTIPTILFSGFFVNFDTIPG 746
            .....:.::.|||:..:..|:|.|..|.:.: ..|...|.....:......||||:|::.:::|.
plant   422 LCFSWQALAYFVLVIWIIVLMANSFVLFLSSLAPNYIAGTSSVTILLAAFFLFSGYFISKESLPK 486

  Fly   747 YLQWVTYVSYVRYGFEGAMVAIYGMDRAKMQCNQMYCHYRVPKKFLEEMSMDNALF--------- 802
            |..::.:.|..:|..:..::            |:..|.:.....:.||.|:::.|.         
plant   487 YWLFMYFFSMYKYALDALLI------------NEYSCLHNKCLVWFEEASVNSCLVTGGDVLDKN 539

  Fly   803 -------WVDAVALIGIFFALRIIAYFVL 824
                   |.:...|:|.|...|::.:.||
plant   540 GLHERQRWFNVYMLLGFFVLYRVLCFLVL 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtetNP_523471.2 3a01204 137..825 CDD:273361 172/679 (25%)
ABCG4NP_194305.1 3a01204 30..572 CDD:273361 172/679 (25%)

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