DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atet and ABCG42

DIOPT Version :9

Sequence 1:NP_001097079.1 Gene:Atet / 33636 FlyBaseID:FBgn0020762 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_001319945.1 Gene:ABCG42 / 827188 AraportID:AT4G15233 Length:1392 Species:Arabidopsis thaliana


Alignment Length:748 Identity:183/748 - (24%)
Similarity:315/748 - (42%) Gaps:189/748 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 NSGGSPNGQKKGTIALSHLPQRPPVDIEFCDISYSVTDSHRRGFKTILKSVSGKFRNGEITAIMG 183
            |:..|.|..|..:...:.||.. |:...|.|:.|.:.....:..: :|..|:|.|:.|.:||:||
plant   775 NTQSSENDSKIASRFKNALPFE-PLTFTFQDVQYIIETPQGKKLQ-LLSGVTGAFKPGVLTALMG 837

  Fly   184 PSGAGKSTLMNILAGYKT-AQLSGSVLINSKERNLRRFRKLSCYIMQDDVLIANLTVREAMMVAA 247
            .|||||:||:::|:|.|| ..:.|.:.:....:....|.::|.|..|.|:...||||:|::..:|
plant   838 VSGAGKTTLLDVLSGRKTFGDIKGQIEVGGYVKVQDTFSRVSGYCEQFDIHSPNLTVQESLKYSA 902

  Fly   248 NLKLGKNMISYAKVVVVEEILETIGLKESVNTLT-----CNLSGGQRKRLSIALELVNNPPVMFF 307
            .|:|..|:.|..|..:|.|:||||.|:|..:::.     ..|:..|||||:||:|||:||.::|.
plant   903 WLRLTSNISSETKCAIVNEVLETIELEEIKDSIVGIPGISGLTTEQRKRLTIAVELVSNPSIIFM 967

  Fly   308 DEPTSGLDSSTCFQLISLLRSLARGGRTIVCTIHQPSARLFEKFDHLYLLAQ-GQCVYEG----- 366
            ||||:|||:.....::..::::|..|||:||||||||..:||.||.|.|:.. |:.:|.|     
plant   968 DEPTTGLDARAAAIVMRAVKNIAETGRTVVCTIHQPSIDIFEAFDELILMKNGGKIIYYGPLGQH 1032

  Fly   367 ---------RVKGLVPYLSSLGYECPSYHNPADYVLEVASGEYGDAVPKLVDAVKSGACKKYAHK 422
                     |:.| ||.|.       ...|||.::|::.|....|         |.|        
plant  1033 SSKVIEYFMRIHG-VPKLK-------ENSNPATWILDITSKSSED---------KLG-------- 1072

  Fly   423 DYVLTLAQKGCNNDIIKGSGSGAENAMAILTLEDEKPPLEDRQLEPSIPVDDPAELKPPKLETQQ 487
               :.|||....:.:.|      ||.|.|                                    
plant  1073 ---VDLAQMYEESTLFK------ENKMVI------------------------------------ 1092

  Fly   488 SQNSDCSVVNMPTNAVDDSCSFSSSKGTQNAVGGSGSGGPSAVVGCMTSLLDSHESVVTLPNKTG 552
             :.:.|                 :|.|::..:                  |.|.           
plant  1093 -EQTRC-----------------TSLGSERLI------------------LSSR----------- 1110

  Fly   553 FPTSGWTQFWILLKRSFRTILRDKMLTHMRLFSHVIVGAIIGMIYYDVGNEASK---IMSNAGCI 614
            :..:.|.||...|.:...:..|:......|:........:.|::::....|.:.   :.:..|.:
plant  1111 YAQTSWEQFKACLWKQHLSYWRNPSYNLTRIIFMSFTCMLCGILFWQKAKEINNQQDLFNVFGSM 1175

  Fly   615 FFVSLFTTFTAMMPTILTFPTEMSVFVREHLNYWYSLKAFYFAKTIADMPFQIVFSSVYVLVVYY 679
            |.|.||:........:.:..||.:||.||..:..|:..|:..|:.:.::|:.:..|.|||::||.
plant  1176 FTVVLFSGINNCSTVLFSVATERNVFYRERFSRMYNSWAYSLAQVLVEIPYSLFQSIVYVIIVYP 1240

  Fly   680 LTSQPMELERV--SMFVLICVLNSLVAQSLGLLIGAGMNIETGVFLGPVTTIPTI---------- 732
            :......:.:|  |.:.:.|.|  |:....|:|:              |...|.:          
plant  1241 MVGYHWSVFKVFWSFYSIFCTL--LIFNYFGMLL--------------VVVTPNVHIAFTLRSSF 1289

  Fly   733 -----LFSGFFVNFDTIPGYLQWVTYVSYVRYGFEGAMVAIYG-MDRAKMQCNQMYCHYRVPKKF 791
                 ||:|:.:....||.:..|:.|:|...:...|.:.:.|| |::..:...:        ||.
plant  1290 YAIVNLFAGYVMPKPNIPRWWIWMYYLSPTSWVLNGLLTSQYGDMEKEILAFGE--------KKK 1346

  Fly   792 LEEMSMDNALFWVDAVALIGIFFALRIIAYFVL 824
            :.:...|...:..|::||:    |:.:||:.:|
plant  1347 VSDFLEDYFGYRYDSLALV----AVVLIAFPIL 1375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtetNP_001097079.1 3a01204 137..825 CDD:273361 179/730 (25%)
ABCG_EPDR 142..366 CDD:213180 90/230 (39%)
ABC2_membrane 564..767 CDD:279410 44/222 (20%)
ABCG42NP_001319945.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D324553at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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