DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atet and ABCG30

DIOPT Version :10

Sequence 1:NP_523471.2 Gene:Atet / 33636 FlyBaseID:FBgn0020762 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_193258.3 Gene:ABCG30 / 827187 AraportID:AT4G15230 Length:1400 Species:Arabidopsis thaliana


Alignment Length:675 Identity:172/675 - (25%)
Similarity:295/675 - (43%) Gaps:140/675 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 PKVANNSGGSPNGQKKGTIALSHLPQRPPVDIEFCDISYSVTDSHRRGFKTILKSVSGKFRNGEI 178
            ||:.:.:       |.|.|.|..    .|:.:.|.::.|.: ::.:...:.:|..::|..:.|.:
plant   788 PKITSRA-------KTGKIILPF----KPLTVTFQNVQYYI-ETPQGKTRQLLSDITGALKPGVL 840

  Fly   179 TAIMGPSGAGKSTLMNILAGYKT-AQLSGSVLINSKERNLRRFRKLSCYIMQDDVLIANLTVREA 242
            |::||.|||||:||:::|:|.|| ..:.|.:.:....:....|.::|.|..|.|:...|:||.|:
plant   841 TSLMGVSGAGKTTLLDVLSGRKTRGIIKGEIKVGGYPKVQETFARVSGYCEQFDIHSPNITVEES 905

  Fly   243 MMVAANLKLGKNMISYAKVVVVEEILETIGL---KESVNTL--TCNLSGGQRKRLSIALELVNNP 302
            :..:|.|:|..|:.|..|..:|:|:|||:.|   |:||..|  ...||..|||||:||:|||.||
plant   906 LKYSAWLRLPYNIDSKTKNELVKEVLETVELDDIKDSVVGLPGISGLSIEQRKRLTIAVELVANP 970

  Fly   303 PVMFFDEPTSGLDSSTCFQLISLLRSLARGGRTIVCTIHQPSARLFEKFDHLYLLAQ-GQCVYEG 366
            .::|.||||:|||:.....::..::::|..|||:||||||||..:||.||.|.|:.. ||.||.|
plant   971 SIIFMDEPTTGLDARAAAIVMRAVKNVAETGRTVVCTIHQPSIDIFETFDELILMKNGGQLVYYG 1035

  Fly   367 RVKGLVPYLSSLGYECPSYHNPADYV--LEVASGEYGDAVPKLVDAVKSGACKKYAHKDYVLTLA 429
                            |...|.:..:  .|..||     :||:                      
plant  1036 ----------------PPGQNSSKVIEYFESFSG-----LPKI---------------------- 1057

  Fly   430 QKGCN--NDIIKGSGSGAENAMAILTLEDEKPPLEDRQLEPSIPVDDPAELKPPKLETQQSQNSD 492
            ||.||  ..|:..:...||..:.|    |.....:|..|           .|..|:..:|..   
plant  1058 QKNCNPATWILDITSKSAEEKLGI----DFSQSYKDSTL-----------YKQNKMVVEQLS--- 1104

  Fly   493 CSVVNMPTNAVDDSCSFSSSKGTQNAVGGSGSGGPSAVVGCMTSLLDSHESVVTLPNKTGFPTSG 557
                             |:|.|::                           .:..|::  |..:.
plant  1105 -----------------SASLGSE---------------------------ALRFPSQ--FSQTA 1123

  Fly   558 WTQFWILLKRSFRTILRDKMLTHMRLFSHVIVGAIIGMIYY----DVGNEASKIMSNAGCIFFVS 618
            |.|....|.:...:..|:......|:...::...:.|::::    |:.|: ..::|..|.::.:.
plant  1124 WVQLKACLWKQHYSYWRNPSHNITRIVFILLDSTLCGLLFWQKAEDINNQ-QDLISIFGSMYTLV 1187

  Fly   619 LFTTFTAMMPTILTFPTEMSVFVREHLNYWYSLKAFYFAKTIADMPFQIVFSSVYVLVVYYLTSQ 683
            :|.........|.....|.:||.||.....||..|:.|::.:.::|:.::.|.:..::||.....
plant  1188 VFPGMNNCAAVINFIAAERNVFYRERFARMYSSWAYSFSQVLIEVPYSLLQSLLCTIIVYPTIGY 1252

  Fly   684 PMELERV--SMFVLICVLNSLVAQSLG-LLIGAGMNIETGVFLGPVTTIPTILFSGFFVNFDTIP 745
            .|.:.::  |::.:.|.|  |:....| |::....||...|.|.........||:||.:....||
plant  1253 HMSVYKMFWSLYSIFCSL--LIFNYSGMLMVALTPNIHMAVTLRSSFFSMLNLFAGFVIPKQKIP 1315

  Fly   746 GYLQWVTYVSYVRYGFEGAMVAIYG 770
            .:..|:.|:|...:..||.:.:.||
plant  1316 KWWIWMYYLSPTSWVLEGLLSSQYG 1340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtetNP_523471.2 3a01204 137..825 CDD:273361 166/652 (25%)
ABCG30NP_193258.3 PLN03140 21..1400 CDD:215599 172/675 (25%)

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