DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atet and ABCG41

DIOPT Version :9

Sequence 1:NP_001097079.1 Gene:Atet / 33636 FlyBaseID:FBgn0020762 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_001329357.1 Gene:ABCG41 / 827186 AraportID:AT4G15215 Length:1397 Species:Arabidopsis thaliana


Alignment Length:703 Identity:166/703 - (23%)
Similarity:311/703 - (44%) Gaps:159/703 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 SHGSQNNLCNGGLGSNNHALAPKVANNSGGSPNGQKKGTIALSHLPQRPPVDIEFCDISYSVTDS 157
            ||| :|:.|:    ..:....|::.:.:       |.|.:.|..    .|:.:.|.::.|.: ::
plant   769 SHG-KNSQCS----EEDFKPCPEITSRA-------KTGKVILPF----KPLTVTFQNVQYYI-ET 816

  Fly   158 HRRGFKTILKSVSGKFRNGEITAIMGPSGAGKSTLMNILAGYKT-AQLSGSVLINSKERNLRRFR 221
            .:...:.:|..::|..:.|.:|::||.|||||:||:::|:|.|| ..:.|.:.:....:....|.
plant   817 PQGKTRQLLFDITGALKPGVLTSLMGVSGAGKTTLLDVLSGRKTRGIIKGEIRVGGYPKVQETFA 881

  Fly   222 KLSCYIMQDDVLIANLTVREAMMVAANLKLGKNMISYAKVVVVEEILETIGLKESVNTLT----- 281
            ::|.|..|.|:...|:||.|::..:|.|:|..|:.:..|..:|:|:|||:.|::..:::.     
plant   882 RVSGYCEQFDIHSPNITVEESLKYSAWLRLPYNIDAKTKNELVKEVLETVELEDIKDSMVGLPGI 946

  Fly   282 CNLSGGQRKRLSIALELVNNPPVMFFDEPTSGLDSSTCFQLISLLRSLARGGRTIVCTIHQPSAR 346
            ..||..|||||:||:|||:||.::|.||||:|||:.....::..::::|..|||:||||||||..
plant   947 SGLSTEQRKRLTIAVELVSNPSIIFLDEPTTGLDARAAAIVMRAVKNVAETGRTVVCTIHQPSID 1011

  Fly   347 LFEKFDHLYLLAQ-GQCVYEGRV----KGLVPYLSSL------GYECPSYHNPADYVLEVASGEY 400
            :||.||.|.|:.. ||.||.|.:    ..::.|..|:      ...|    |||.::|::     
plant  1012 IFETFDELILMKDGGQLVYYGPLGKHSSKVIKYFESIPGVPKVQKNC----NPATWMLDI----- 1067

  Fly   401 GDAVPKLVDAVKSGACKKYAHKDYVLTLAQKGCNNDIIKGSGSGAENAMAILTLEDEKPPLEDRQ 465
                          .||...|: ..:..||...::.:.|      ||.|.:..|.          
plant  1068 --------------TCKSAEHR-LGMDFAQAYKDSTLYK------ENKMVVEQLS---------- 1101

  Fly   466 LEPSIPVDDPAELKPPKLETQQSQNSDCSVVNMPTNAVDDSCSFSSSKGTQNAVGGSGSGGPSAV 530
                                                        |:|.|::              
plant  1102 --------------------------------------------SASLGSE-------------- 1108

  Fly   531 VGCMTSLLDSHESVVTLPNKTGFPTSGWTQFWILLKRSFRTILRDKMLTHMRLFSHVIVGAIIGM 595
                         .::.|::  :..:||.|....|.:...:..|:......|:...::...:..:
plant  1109 -------------ALSFPSR--YSQTGWGQLKACLWKQHCSYWRNPSHNLTRIVFILLNSLLCSL 1158

  Fly   596 IYY----DVGNEASKIMSNAGCIFFVSLFTTFTAMMPTILTF-PTEMSVFVREHLNYWYSLKAFY 655
            :::    |:.|: ..:.|..|.::.:.:|:... ...|::.| .||.:||.||.....||..|:.
plant  1159 LFWQKAKDINNQ-QDLFSIFGSMYTIVIFSGIN-NCATVMNFIATERNVFYRERFARMYSSWAYS 1221

  Fly   656 FAKTIADMPFQIVFSSVYVLVVYYLTSQPMELERV--SMFVLICVLNSLVAQSLG-LLIGAGMNI 717
            |::.:.::|:.::.|.:..::||.:....|.:.::  |::.:.|.|  |:....| |::....||
plant  1222 FSQVLVEVPYSLLQSLLCTIIVYPMIGYHMSVYKMFWSLYSIFCSL--LIFNYCGMLMVALTPNI 1284

  Fly   718 ETGVFLGPVTTIPTILFSGFFVNFDTIPGYLQWVTYVSYVRYGFEGAMVAIYG 770
            ...:.|.........||:||.:....||.:..|:.|:|...:..||.:.:.||
plant  1285 HMALTLRSTFFSMVNLFAGFVMPKQKIPKWWIWMYYLSPTSWVLEGLLSSQYG 1337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtetNP_001097079.1 3a01204 137..825 CDD:273361 157/659 (24%)
ABCG_EPDR 142..366 CDD:213180 85/230 (37%)
ABC2_membrane 564..767 CDD:279410 45/210 (21%)
ABCG41NP_001329357.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D324553at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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