DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atet and ABCG16

DIOPT Version :9

Sequence 1:NP_001097079.1 Gene:Atet / 33636 FlyBaseID:FBgn0020762 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_191069.2 Gene:ABCG16 / 824675 AraportID:AT3G55090 Length:736 Species:Arabidopsis thaliana


Alignment Length:821 Identity:196/821 - (23%)
Similarity:338/821 - (41%) Gaps:162/821 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 NPNPNASTNSRQEPVPLLSQLKLTNDLKQNSHGSQNNLCNGGLGSNNHALAPKVANNSGGSPNGQ 127
            |..|..|.......:.|...||..:|:::...|.:..:         |    :..:..|.|.:|.
plant    10 NATPFHSMEIISSSLTLGQLLKNVSDVRKVEVGDETPV---------H----EFFDRDGSSLDGD 61

  Fly   128 KKGTIALSHLPQRPPVDIEFCDISYSVT-----DSH------RRGF---KTILKSVSGKFRNGEI 178
            .      .||.:..|..:.|.:::|:|:     |.|      |..|   ||:|.::||:.|:|||
plant    62 N------DHLMRPVPFVLSFNNLTYNVSVRRKLDFHDLVPWRRTSFSKTKTLLDNISGETRDGEI 120

  Fly   179 TAIMGPSGAGKSTLMNILAG-YKTAQLSGSVLINSKERNLRRFRKLSCYIMQDDVLIANLTVREA 242
            .|::|.||:|||||::.||. .....|.|:|.:|.:....|..:.:|.|:||||:|...|||.|.
plant   121 LAVLGASGSGKSTLIDALANRIAKGSLKGTVTLNGEALQSRMLKVISAYVMQDDLLFPMLTVEET 185

  Fly   243 MMVAANLKLGKNMISYAKVVVVEEILETIGLKESVNTLTCN-----LSGGQRKRLSIALELVNNP 302
            :|.||..:|.:::....|.:.|:.:::.:|::.:..|:..:     :|||:|:|:||.::::::|
plant   186 LMFAAEFRLPRSLPKSKKKLRVQALIDQLGIRNAAKTIIGDEGHRGISGGERRRVSIGIDIIHDP 250

  Fly   303 PVMFFDEPTSGLDSSTCFQLISLLRSLARGGRTIVCTIHQPSARLFEKFDHLYLLAQGQCVYEGR 367
            .|:|.|||||||||::.|.::.:|:.:|..|..|:.:|||||.|:....|.|..|::|..|:.|.
plant   251 IVLFLDEPTSGLDSTSAFMVVKVLKRIAESGSIIIMSIHQPSHRVLSLLDRLIFLSRGHTVFSGS 315

  Fly   368 VKGLVPYLSSLGYECPSYHNPADYVLEVASGEYGDAVPKLVDAVKSGACKKYAHKDYVLTLAQKG 432
            ...|..:.:..|...|...|..::.|               |.::.                   
plant   316 PASLPSFFAGFGNPIPENENQTEFAL---------------DLIRE------------------- 346

  Fly   433 CNNDIIKGSGSGAENAMAILTLEDEKPPLEDRQLEPSIPVDDPAELKPPKLETQQSQNSDCSVVN 497
                 ::||..|....:..           :::.:......:|..|.||     .|.|       
plant   347 -----LEGSAGGTRGLVEF-----------NKKWQEMKKQSNPQTLTPP-----ASPN------- 383

  Fly   498 MPTNAVDDSCSFSSSKGTQNAVGGSGSGGPSAVVGCMTSLLDSHESVVTLPNKTGFPTSGWTQFW 562
             |...:.::.|.|.|:|...:.||.||           |:::.....:.:|   .|....|.:..
plant   384 -PNLTLKEAISASISRGKLVSGGGGGS-----------SVINHGGGTLAVP---AFANPFWIEIK 433

  Fly   563 ILLKRSFRTILRDKMLTHMRLFSHVIVGAIIGMIYYDVGNEASKIMSNAGCIFFVSLFTTFTAMM 627
            .|.:||.....|...|..|||.:.::.|.|:..:::.:.|....:....| .|..::.|.|....
plant   434 TLTRRSILNSRRQPELLGMRLATVIVTGFILATVFWRLDNSPKGVQERLG-FFAFAMSTMFYTCA 497

  Fly   628 PTILTFPTEMSVFVREHLNYWYSLKAFYFAKTIADMPFQIVFSSVYVLVVYYLTSQPMELERVSM 692
            ..:..|..|..:|:||.....|...::..:..|...|..|..|..:.:..::...    ||...|
plant   498 DALPVFLQERYIFMRETAYNAYRRSSYVLSHAIVTFPSLIFLSLAFAVTTFWAVG----LEGGLM 558

  Fly   693 -FVLIC--VLNSLVAQSLGLLIGAGMNIETGVFLGPVTTIPT----ILFSGFFVNFDTIPGYLQW 750
             |:..|  :|.|..:.|..:...:|  :...|.||....:..    :||||||:|.|.||.|..|
plant   559 GFLFYCLIILASFWSGSSFVTFLSG--VVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPQYWIW 621

  Fly   751 VTYVSYVRYGFEGAM------------------------VAIYGMDRAKMQCNQMYCHYRVPKK- 790
            ..|:|.|:|.:|..:                        ...|||....:.........|:... 
plant   622 FHYLSLVKYPYEAVLQNEFSDPTECFVRGVQLFDNSPLGELTYGMKLRLLDSVSRSIGMRISSST 686

  Fly   791 -------FLEEMSMDNALFWVDAVALIGIFFALRIIAYFVL 824
                   .|::..:.....|...:..:|..|..||:.|..|
plant   687 CLTTGADVLKQQGVTQLSKWNCLLITVGFGFLFRILFYLCL 727

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtetNP_001097079.1 3a01204 137..825 CDD:273361 183/747 (24%)
ABCG_EPDR 142..366 CDD:213180 87/243 (36%)
ABC2_membrane 564..767 CDD:279410 54/233 (23%)
ABCG16NP_191069.2 3a01204 75..735 CDD:273361 181/737 (25%)
P-loop_NTPase 85..314 CDD:304359 83/228 (36%)
ABC2_membrane 435..638 CDD:279410 54/209 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.810

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