DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atet and ABCG27

DIOPT Version :10

Sequence 1:NP_523471.2 Gene:Atet / 33636 FlyBaseID:FBgn0020762 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_001319729.1 Gene:ABCG27 / 824396 AraportID:AT3G52310 Length:743 Species:Arabidopsis thaliana


Alignment Length:203 Identity:39/203 - (19%)
Similarity:75/203 - (36%) Gaps:59/203 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 KEC--VDRKIITCLNG--GSPVDDHCSYLKGFEGPKCEKIEISFEEN------------------ 288
            |.|  .:.::|.|.:.  |....::|.||......|.: :||:...|                  
plant    41 KSCQVENGRVIACFDSLKGRCSRENCKYLHPPTHLKTQ-LEINGRNNLIQQKTAAAMLAQQMQFM 104

  Fly   289 --GYAIYPL----IDPGNTTSISMELAPNSEDGLVLYIGPWIVDHNPEAPALEFLALELIAKRPV 347
              |..:.|:    :.|...|:.::..||        |:       .|..|.:..:..|::...||
plant   105 FPGTQLQPMPTFPVGPALGTNTAISFAP--------YL-------TPVTPGVGLVPTEILPSTPV 154

  Fly   348 LWFGVGGNIERLRHPSVQQRNSFSIEIVIFPDMIQLIVD---GYKMRFSTSRDARVKHFTNS-IL 408
            :   |.|:      |.|....|.:.:.::..|.:::..:   |...|..|  |.|..|..:| ::
plant   155 I---VPGS------PPVSVPGSTAAQKLLRTDKLEVCREFQRGNCARGET--DCRFAHPADSTMI 208

  Fly   409 HLGDSSIT 416
            ...|:::|
plant   209 DTNDNTVT 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtetNP_523471.2 3a01204 137..825 CDD:273361 39/203 (19%)
ABCG27NP_001319729.1 PLN03211 143..738 CDD:215634 18/85 (21%)

Return to query results.
Submit another query.