DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atet and ABCG2

DIOPT Version :9

Sequence 1:NP_001097079.1 Gene:Atet / 33636 FlyBaseID:FBgn0020762 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_181272.1 Gene:ABCG2 / 818312 AraportID:AT2G37360 Length:755 Species:Arabidopsis thaliana


Alignment Length:745 Identity:178/745 - (23%)
Similarity:309/745 - (41%) Gaps:156/745 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 SGNPNPNPNASTNSRQEPVPLLSQLKLTNDLKQNSHGSQNNLCNGGLGS---------NNHALAP 114
            |..|...|:.:|   :..|.....|....|.:.:...|...|   |:.|         |:.|.||
plant    29 SVEPQGRPSDTT---RVSVTFAEHLMNVEDARNDESASSRAL---GIASPINSAASSFNSWASAP 87

  Fly   115 KVANNSGGSPNGQKKGTIALSHLPQRPPVDIEFCDISYSV---------TDSHRRG------FKT 164
            ..:.:|.                    |..:.|.|::|||         ....|.|      .|.
plant    88 ASSISSS--------------------PFVLSFTDLTYSVKIQKKFNPLACCRRSGNDSSVNTKI 132

  Fly   165 ILKSVSGKFRNGEITAIMGPSGAGKSTLMNILAGYKTAQ--LSGSVLINSKERNLRRFRKLSCYI 227
            :|..:||:.|.||:.|::|.||:|||||::.||. :.|:  |.||:.:|.:.......:.:|.|:
plant   133 LLNGISGEAREGEMMAVLGASGSGKSTLIDALAN-RIAKDSLRGSITLNGEVLESSMQKVISAYV 196

  Fly   228 MQDDVLIANLTVREAMMVAANLKLGKNMISYAKVVVVEEILETIGLKESVNTLTCN-----LSGG 287
            ||||:|...|||.|.:|.:|..:|.:::....|...|:.:::.:||:.:..|:..:     :|||
plant   197 MQDDLLFPMLTVEETLMFSAEFRLPRSLSKKKKKARVQALIDQLGLRSAAKTVIGDEGHRGVSGG 261

  Fly   288 QRKRLSIALELVNNPPVMFFDEPTSGLDSSTCFQLISLLRSLARGGRTIVCTIHQPSARLFEKFD 352
            :|:|:||..:::::|.::|.|||||||||::.:.:|.:|:.:|:.|..::.:|||||.|:....|
plant   262 ERRRVSIGNDIIHDPIILFLDEPTSGLDSTSAYMVIKVLQRIAQSGSIVIMSIHQPSYRIMGLLD 326

  Fly   353 HLYLLAQGQCVYEGRVKGLVPYLSSLGYECPSYHNPADYVLE-VASGEYG-DAVPKLVDAVKSGA 415
            .|..|::|..||.|....|..:.|...:..|...|..::.|: :...||. :....||:..|...
plant   327 QLIFLSKGNTVYSGSPTHLPQFFSEFKHPIPENENKTEFALDLIRELEYSTEGTKPLVEFHKQWR 391

  Fly   416 CKKYAHKDYVLTLAQKGCNNDIIKGSGSGAENAMAILTLEDEKPPLEDRQLEPSIPVDDPAELKP 480
            .|                                                             :.
plant   392 AK-------------------------------------------------------------QA 395

  Fly   481 PKLETQQSQNSDCSVVNMPTNAVDDSCSFSSSKGTQNAVGGSGSGGPSAVVGCMTSLLDSHESVV 545
            |.......:|::.|       ::.::.:.|.|:|  ..|.|:.:...|.:.              
plant   396 PSYNNNNKRNTNVS-------SLKEAITASISRG--KLVSGATNNNSSNLT-------------- 437

  Fly   546 TLPNKTGFPTSGWTQFWILLKRSFRTILRDKMLTHMRLFSHVIVGAIIGMIYYDVGNEASKIMSN 610
              |:...|....|.:..::.||:.....|...|..|||.:.::.|.|:..::.::.|........
plant   438 --PSFQTFANPFWIEMIVIGKRAILNSRRQPELLGMRLGAVMVTGIILATMFTNLDNSPKGAQER 500

  Fly   611 AGCIFFVSLFTTFTAMMPTILTFPTEMSVFVREHLNYWYSLKAFYFAKTIADMPFQIVFSSVYVL 675
            .| .|..::.|||......|..|..|..:|:||.....|...::..:::|..:|..||.|:.:..
plant   501 LG-FFAFAMSTTFYTCAEAIPVFLQERYIFMRETAYNAYRRSSYVLSQSIISIPALIVLSASFAA 564

  Fly   676 VVYYLTSQPMELERVS---MFVLICVLNSLVAQS--LGLLIGAGMNIETGVFLGPVTTIPTILFS 735
            ..::...    |:..:   .|....:|.|..|.|  :..|.|...|:..|..:........:|||
plant   565 TTFWAVG----LDGGANGFFFFYFTILASFWAGSSFVTFLSGVIPNVMLGFTVVVAILAYFLLFS 625

  Fly   736 GFFVNFDTIPGYLQWVTYVSYVRYGFEGAM 765
            |||::.|.||.|..|..|:|.|:|.:||.:
plant   626 GFFISRDRIPVYWLWFHYISLVKYPYEGVL 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtetNP_001097079.1 3a01204 137..825 CDD:273361 162/658 (25%)
ABCG_EPDR 142..366 CDD:213180 84/245 (34%)
ABC2_membrane 564..767 CDD:279410 54/207 (26%)
ABCG2NP_181272.1 3a01204 95..754 CDD:273361 162/653 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.810

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