DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atet and NAP12

DIOPT Version :10

Sequence 1:NP_523471.2 Gene:Atet / 33636 FlyBaseID:FBgn0020762 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_181238.4 Gene:NAP12 / 818275 AraportID:AT2G37010 Length:1082 Species:Arabidopsis thaliana


Alignment Length:873 Identity:203/873 - (23%)
Similarity:341/873 - (39%) Gaps:227/873 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 SAATTAPNAVLYTSGNMSLSTLSTGSGNPNPNP----NASTNSRQEPVPLLSQLKLTNDLKQNSH 94
            :|...|.|..:..|..:|.:.....|...:..|    ..|.:.::||..|...:|...:...|:.
plant   349 TAKGVAKNQKMGLSAQLSQTFSRMKSARKDATPVKASGKSKDKKKEPSNLTKMMKSMEENPSNNE 413

  Fly    95 GSQNNLCNGGLGS--NNHALAPK-----------------VANNSGGSPNGQK---KGTIAL--- 134
            |     .|.|.||  .....|||                 :........|.:.   .|.|::   
plant   414 G-----FNVGTGSKPGKKPQAPKGKQLHTQSQIFKYAYGQIEKEKAMEQNNKNLTFSGVISMATD 473

  Fly   135 SHLPQRPPVDIEFCDISYSVTDSHRRGFKTILKSVSGKFRNGEITAIMGPSGAGKSTLMNILAGY 199
            :.:..||.:::.|.|::.::...|    |.||:||:||...|.::|:||||||||:|.::.|||.
plant   474 TEMRTRPVIEVAFKDLTLTLKGKH----KHILRSVTGKIMPGRVSAVMGPSGAGKTTFLSALAGK 534

  Fly   200 KT-AQLSGSVLINSKERNLRRFRKLSCYIMQDDVLIANLTVREAMMVAANLKLGKNMISYAKVVV 263
            .| ...:|.:|||.:..::..::|::.::.||||:..||||.|.:..:|..:|...|....||::
plant   535 ATGCTRTGLILINGRNDSINSYKKITGFVPQDDVVHGNLTVEENLRFSARCRLSAYMSKADKVLI 599

  Fly   264 VEEILETIGLKESVNTLT-----CNLSGGQRKRLSIALELVNNPPVMFFDEPTSGLDSSTCFQLI 323
            :|.::|::||:...::|.     ..:|||||||:::.:|:|..|.::..||||:||||::...|:
plant   600 IERVIESLGLQHVRDSLVGTIEKRGISGGQRKRVNVGVEMVMEPSLLILDEPTTGLDSASSQLLL 664

  Fly   324 SLLRSLARGGRTIVCTIHQPSARLFEKFDHLYLLAQ-GQCVYEGRVKGLVPYLSSLGYECPSYHN 387
            ..||..|..|..|...:||||..:::.||.:.:||: |..||.|.||.:..|.:.:|...|...|
plant   665 RALRREALEGVNICMVVHQPSYTMYKMFDDMIILAKGGLTVYHGSVKKIEEYFADIGITVPDRVN 729

  Fly   388 PADYVLEVASG---EYGDAVPKLVDAVKSGACKKYAHKDYVLTLAQKGCNNDIIK--------GS 441
            |.|:.:::..|   ..||.      .::....:...|..|.:.       :|::|        .:
plant   730 PPDHYIDILEGIVKPDGDI------TIEQLPVRWMLHNGYPVP-------HDMLKFCDGLPSSST 781

  Fly   442 GSGAE----NAMAILTLEDEKPPLEDRQLEPSIPVDDPAELKPPKLETQQSQNSDCSVVNMPTNA 502
            ||..|    |:.:....:|.|..:|                    :...|.|:            
plant   782 GSAQEDSTHNSFSNDLWQDVKTNVE--------------------ITKDQLQH------------ 814

  Fly   503 VDDSCSFSSSKGTQNAVGGSGSGGPSAVVGCMTSLLDSHESVVTLPNKTGFPTSGWTQFWILLKR 567
                 ::|:|....|.|                                 .||.| .|:...:.|
plant   815 -----NYSNSHDNSNRV---------------------------------TPTVG-RQYRYFVGR 840

  Fly   568 SFRTILRDKMLTHMRLFSHVIVGAIIGMIYYDVGNEASKIMSNAGCIFFVSLFTTFTAMMPTILT 632
            ..:..||:..|..:.....::.||.:|.: ..|.:|....:.....|..|||....:|:..    
plant   841 VGKQRLREARLQALDFLILLVAGACLGTL-AKVNDETIDTLGYTYTIIAVSLLCKISALRS---- 900

  Fly   633 FPTEMSVFVREHLNYW------YSLKAFYFAKTIADMPFQIVFSSVYVLVVYYLTSQPMELERVS 691
                   |..:.|.||      .|..|.:.||...|....|:...|| |.::|..:.|......:
plant   901 -------FSVDKLQYWRESAAGISSLAHFMAKDTMDHLNTIMKPLVY-LSMFYFFNNPRSSFEDN 957

  Fly   692 MFVLICVLNSLVAQSLGLLIGAGMNIETGVFLGPVTTIPTILFSGFFVNFDTIPGYLQWVTYVSY 756
            ..||:|::..:                ||     :..|..||:|         |...|.::.:..
plant   958 YIVLVCLVYCV----------------TG-----MAYIFAILYS---------PSAAQLLSVLVP 992

  Fly   757 VRYGFEGAMVAIYGMDRAKMQCNQM--YCHYRVPKKFLEEMSMDNAL----FWVDA--------- 806
            |      .|..|...|:..|....:  :|:   ||..||...:.||.    .||..         
plant   993 V------VMTLIANQDKESMVLKYLGSFCY---PKWTLEAFVLSNAQRYSGVWVVTRCSSLSQNG 1048

  Fly   807 ----------VALIGIFFALRIIAYFVL 824
                      :.|:.:....|.||||.:
plant  1049 YDLSDWILCLIVLVLMGLICRFIAYFCM 1076

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtetNP_523471.2 3a01204 137..825 CDD:273361 179/741 (24%)
NAP12NP_181238.4 DUF4674 <303..414 CDD:464823 13/64 (20%)
ABCG_EPDR 482..708 CDD:213180 84/229 (37%)
ABC2_membrane_7 682..1082 CDD:465963 104/531 (20%)

Return to query results.
Submit another query.