DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atet and ABCG5

DIOPT Version :9

Sequence 1:NP_001097079.1 Gene:Atet / 33636 FlyBaseID:FBgn0020762 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_178984.1 Gene:ABCG5 / 815846 AraportID:AT2G13610 Length:649 Species:Arabidopsis thaliana


Alignment Length:703 Identity:177/703 - (25%)
Similarity:308/703 - (43%) Gaps:118/703 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 RPPVD--IEFCDISYSVTDSHRRGFKTILKSVSGKFRNGEITAIMGPSGAGKSTLMNILAGYKTA 202
            ||..|  ::..:.|..:.|......|.:||.|:.:.:..||.||:||||||||:|:.|||.....
plant    35 RPEADQPVKTEEESLKLEDETGNKVKHVLKGVTCRAKPWEILAIVGPSGAGKSSLLEILAARLIP 99

  Fly   203 QLSGSVLINSKERNLRRFRKLSCYIMQDDVLIANLTVREAMMVAANLKL---GKNMISYAKVVVV 264
            | :|||.:|.:..:...|:|:|.|:.|.|.|...|||.|.::.:|.|:|   ...:.|..|.:|.
plant   100 Q-TGSVYVNKRPVDRANFKKISGYVTQKDTLFPLLTVEETLLFSAKLRLKLPADELRSRVKSLVH 163

  Fly   265 EEILETIGLKESVNTLTCNLSGGQRKRLSIALELVNNPPVMFFDEPTSGLDSSTCFQLISLLRSL 329
            |..||.:......:.....:|||:|:|:||.:|::::|.|:..|||||||||::...:|.:|:.:
plant   164 ELGLEAVATARVGDDSVRGISGGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALLIIDMLKHM 228

  Fly   330 AR-GGRTIVCTIHQPSARLFEKFDHLYLLAQGQCVYEGRVKGLVPYLSSLGYECPSYHNPADYVL 393
            |. .||||:.|||||..|:.::|:.:.|||.|..:.:|.|..|..||.|.|...|.:.|..::.:
plant   229 AETRGRTIILTIHQPGFRIVKQFNSVLLLANGSTLKQGSVDQLGVYLRSNGLHPPLHENIVEFAI 293

  Fly   394 EVASGEYGDAVPKLVDAVKSGACKKYAHKDYVLTLAQKGCNNDIIKGSGSGAENAMAILTLEDEK 458
            |        ::..:....:....::.||   |||                             .:
plant   294 E--------SIESITKQQRLQESRRAAH---VLT-----------------------------PQ 318

  Fly   459 PPLEDRQLEPSIPVDDPAELKPPKLET----QQSQNSDCSVVNMPTNAVDDSCSFSSSKGTQNAV 519
            ..|::::.|     |...|.|..|...    ||::.:|...:|:.|....|              
plant   319 TTLQEKRSE-----DSQGESKSGKFTLQQLFQQTRVADVGTMNIATEFTRD-------------- 364

  Fly   520 GGSGSGGPSAVVGCMTSLLDSHESVVTLPNKTGFPTSGWTQFWILLKRSFRTILRDKMLTHMRLF 584
                                             |..|...:..||..|..:.|.|.|.|...|..
plant   365 ---------------------------------FANSRLEETMILTHRFSKNIFRTKELFACRTV 396

  Fly   585 SHVIVGAIIGMIYYDVGNEASKIMSNAGCIFFVSLFTTFTAMMPTILTFPTEMSVFVREHLNYWY 649
            ..:..|.::|:|::::.::........|...|:..| ..|:.:..:..|..|..:.::|..:..|
plant   397 QMLGSGIVLGLIFHNLKDDLKGARERVGLFAFILTF-LLTSTIEALPIFLQEREILMKETSSGSY 460

  Fly   650 SLKAFYFAKTIADMPFQIVFSSVYVLVVYYLTS-QPMELERVSMFVLICVL----NSLVAQSLGL 709
            .:.::..|..:..:||.::.:.::...||:|.. .|..:..:...:||.::    ||:|.....|
plant   461 RVSSYAVANGLVYLPFLLILAILFSTPVYWLVGLNPSFMAFLHFSLLIWLILYTANSVVVCFSAL 525

  Fly   710 LIG--AGMNIETGVFLGPVTTIPTILFSGFFVNFDTIPGYLQWVTYVSYVRYGFEGAMVAIYGMD 772
            :..  .|.::.:|| :|..     .||||:|::...||||..::.|:|..:|.|||.::..:...
plant   526 VPNFIVGNSVISGV-MGSF-----FLFSGYFISNHEIPGYWIFMHYISLFKYPFEGFLINEFSKS 584

  Fly   773 RAKMQCNQMYCHYRVPKKFLEEMSMDNALFWVDAVALIGIFFALRIIAYFVLR 825
            ...::.....| ....:..|:|........|.:.|.::......|.|:|.:||
plant   585 NKCLEYGFGKC-LVTEEDLLKEERYGEESRWRNVVIMLCFVLLYRFISYVILR 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtetNP_001097079.1 3a01204 137..825 CDD:273361 175/701 (25%)
ABCG_EPDR 142..366 CDD:213180 85/229 (37%)
ABC2_membrane 564..767 CDD:279410 50/209 (24%)
ABCG5NP_178984.1 3a01204 37..638 CDD:273361 175/701 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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