DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atet and abcg4b

DIOPT Version :9

Sequence 1:NP_001097079.1 Gene:Atet / 33636 FlyBaseID:FBgn0020762 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_001104682.1 Gene:abcg4b / 794238 ZFINID:ZDB-GENE-080215-10 Length:644 Species:Danio rerio


Alignment Length:748 Identity:344/748 - (45%)
Similarity:472/748 - (63%) Gaps:117/748 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 TNDLKQNSHGSQNNLCNGGLGSNNHALAPKVANNSGGSPNGQKKGTIALSHLPQRPPVDIEFCDI 150
            |:|....|.|.:.:|||||.......|...:..........|:     .||||:|..|::||.::
Zfish     5 TSDPGSVSIGMEESLCNGGSQPQEAPLLTHLKKVENHITEAQR-----FSHLPKRTTVELEFKEL 64

  Fly   151 SYSVTDS---HRRGFKTILKSVSGKFRNGEITAIMGPSGAGKSTLMNILAGYKTAQLSGSVLINS 212
            .|::.:.   .::|:|.:||.:||||.:.|:..|||||||||||||||||||:...::|.:|:|.
Zfish    65 CYTIREGPWWKKQGYKALLKCLSGKFSSRELIGIMGPSGAGKSTLMNILAGYRETGMTGQILVNG 129

  Fly   213 KERNLRRFRKLSCYIMQDDVLIANLTVREAMMVAANLKLGKNMISYAKVVVVEEILETIGLKESV 277
            |.|:.|.|||:||||||:|.|:.:|:|:|||||:|||||  |..|..|..:::|||..:||.|.|
Zfish   130 KLRDPRTFRKMSCYIMQEDKLLPHLSVQEAMMVSANLKL--NESSEVKKELIKEILTALGLHECV 192

  Fly   278 NTLTCNLSGGQRKRLSIALELVNNPPVMFFDEPTSGLDSSTCFQLISLLRSLARGGRTIVCTIHQ 342
            :|.|.:|||||.|||:|||||||||||||||||||||||::|||::||::|||:|||||:|||||
Zfish   193 HTRTVSLSGGQCKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKSLAQGGRTIICTIHQ 257

  Fly   343 PSARLFEKFDHLYLLAQGQCVYEGRVKGLVPYLSSLGYECPSYHNPADYVLEVASGEYGDAVPKL 407
            |||:|||.||.||:|:||||:|:|.|..|:|||..||..||:||||||:::|||||||||..|.|
Zfish   258 PSAKLFEMFDKLYILSQGQCIYKGSVPYLIPYLRGLGLHCPTYHNPADFIIEVASGEYGDLNPVL 322

  Fly   408 VDAVKSGACKKYAHKDYVLTLAQKGCNNDIIKGSGSGAENAMAILTLEDEKPPLEDRQLEPSIPV 472
            .:||:.|.|                                           .||::        
Zfish   323 FEAVQGGMC-------------------------------------------ALEEK-------- 336

  Fly   473 DDPAELKPPKLETQQSQNSDCSVVNMPTNAVDDSCSFSSSKGTQNAVGGSGSGGPSAVVGCMTSL 537
                                |:.::..|..   ||:....|            .|..|       
Zfish   337 --------------------CNCIDKTTVT---SCAAKCVK------------DPGHV------- 359

  Fly   538 LDSHESVVTLPNKTGFPTSGWTQFWILLKRSFRTILRDKMLTHMRLFSHVIVGAIIGMIYYDVGN 602
             :||.          |.||..|||.||.||:|.||.||::|||:||.||:.:|.:||::|.::||
Zfish   360 -ESHT----------FATSSLTQFCILFKRTFITICRDQVLTHLRLMSHISIGVLIGLLYLNIGN 413

  Fly   603 EASKIMSNAGCIFFVSLFTTFTAMMPTILTFPTEMSVFVREHLNYWYSLKAFYFAKTIADMPFQI 667
            :|||:.:|.|.:||..||..|.|:|||:||||.||:||:||||||||||||:|.|||:||:|||:
Zfish   414 DASKVFNNTGFLFFSMLFLMFGALMPTVLTFPLEMAVFLREHLNYWYSLKAYYLAKTMADIPFQV 478

  Fly   668 VFSSVYVLVVYYLTSQPMELERVSMFVLICVLNSLVAQSLGLLIG-AGMNIETGVFLGPVTTIPT 731
            :...:|..:||::|.||.|..|..:|:.:.:..:|||||||||:| |..:::...|:||||.||.
Zfish   479 LCPIMYCSIVYWMTEQPPEASRYLLFLALSICTALVAQSLGLLVGAASTSLQVATFVGPVTGIPV 543

  Fly   732 ILFSGFFVNFDTIPGYLQWVTYVSYVRYGFEGAMVAIYGMDRAKMQCNQMYCHYRVPKKFLEEMS 796
            :|||||||||||||.||||.:||||||||||..:::||||:|.:.:|....|.::.|::.|:.:.
Zfish   544 LLFSGFFVNFDTIPEYLQWSSYVSYVRYGFEEVILSIYGMNRTERECPGRVCKFQRPEEVLQLLD 608

  Fly   797 MDNALFWVDAVALIGIFFA-LRIIAYFVLRWKL 828
            :::|..::|.:.| ||||. ||:..|.|||:|:
Zfish   609 VEDAKLYMDFIVL-GIFFVILRLATYVVLRYKI 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtetNP_001097079.1 3a01204 137..825 CDD:273361 328/692 (47%)
ABCG_EPDR 142..366 CDD:213180 138/226 (61%)
ABC2_membrane 564..767 CDD:279410 118/203 (58%)
abcg4bNP_001104682.1 3a01204 42..644 CDD:273361 334/711 (47%)
ABCG_EPDR 57..281 CDD:213180 138/225 (61%)
ABC2_membrane 375..574 CDD:279410 116/198 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574360
Domainoid 1 1.000 274 1.000 Domainoid score I1737
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H75179
Inparanoid 1 1.050 699 1.000 Inparanoid score I653
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177791at33208
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 1 1.000 - - otm25175
orthoMCL 1 0.900 - - OOG6_100076
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.760

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