DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atet and abcg2

DIOPT Version :9

Sequence 1:NP_001097079.1 Gene:Atet / 33636 FlyBaseID:FBgn0020762 Length:832 Species:Drosophila melanogaster
Sequence 2:XP_012819987.2 Gene:abcg2 / 734088 XenbaseID:XB-GENE-991895 Length:682 Species:Xenopus tropicalis


Alignment Length:764 Identity:203/764 - (26%)
Similarity:357/764 - (46%) Gaps:165/764 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 TIALSH-LPQR------PPVD----------------IEFCDISYSVTDSHRRGF--------KT 164
            ||.::| |||.      |.|:                :.|.:|:|.|  ..:.|.        :.
 Frog    19 TINMTHELPQTVVQILDPTVNGEVKKKGRKKTLSGAVLSFYNINYKV--KVKSGLICCRKVTERV 81

  Fly   165 ILKSVSGKFRNGEITAIMGPSGAGKSTLMNILAGYKTAQ-LSGSVLINSKERNLRRFRKLSCYIM 228
            ||..|:|..|.| :.||:||:|:|||:|:::||..|... |||.||::. |.....|:.||.|::
 Frog    82 ILNDVNGIMRPG-LNAILGPTGSGKSSLLDVLAARKDPNGLSGQVLVDG-EPQPSNFKCLSGYVV 144

  Fly   229 QDDVLIANLTVREAMMVAANLKLGKNMISYAKVVVVEEILETIGLKESVNT-----LTCNLSGGQ 288
            ||||::..|::||.:..:|.|:|.:::....|...:.::::.:||.:..::     ....:|||:
 Frog   145 QDDVVMGTLSIRENLQFSAALRLPRSVKQKEKDERINQVIKELGLTKVADSKVGTQFIRGVSGGE 209

  Fly   289 RKRLSIALELVNNPPVMFFDEPTSGLDSSTCFQLISLLRSLARGGRTIVCTIHQPSARLFEKFDH 353
            |||.:|.:||:.:|.::|.||||:|||:||...::.||:.::|.|:||:.:||||...:|..||.
 Frog   210 RKRTNIGMELITDPGILFLDEPTTGLDASTANAVLLLLKRMSRQGKTIIFSIHQPRYSIFRLFDS 274

  Fly   354 LYLLAQGQCVYEGRVKGLVPYLSSLGYECPSYHNPADYVLEVASGE-YGDAVPKLVDAVKSGACK 417
            |.|||.|:.::.|..:..:.|.:.|||||.|::||||:.|::.:|: ...|:.||          
 Frog   275 LTLLAGGRLLFHGPSRDALDYFTGLGYECESHNNPADFFLDIINGDSTAVALNKL---------- 329

  Fly   418 KYAHKDYVLTLAQKGCNNDIIKGSGSGAENAMAILTLEDEKPPLEDRQLEPSIPVDDPAELKPPK 482
                :|..|...||..|::   ||.:..||             |.::....|..::..|||:...
 Frog   330 ----EDVELENEQKEVNDN---GSKTVVEN-------------LSEQFCTTSYYLETKAELEKMS 374

  Fly   483 LETQQSQNSDCSVVNMPTNAVDDSCSFSSSKGTQNAVGGSGSGGPSAVVGCMTSLLDSHESVVTL 547
            |..:...|                  |.:.:.|.|                 ||.|...:     
 Frog   375 LGKKIKSN------------------FFARQITYN-----------------TSFLHQLK----- 399

  Fly   548 PNKTGFPTSGWTQFWILLKRSFRTILRDKMLTHMRLFSHVIVGAIIGMIYYDVGNEASKIMSNAG 612
                          |: .||||:.:.|:...:..::...:::..|:|.|::.|..:.|.|.:..|
 Frog   400 --------------WV-CKRSFKNLWRNPQASIAQVMVTLVLALIVGAIFFGVKEDVSGIQNRVG 449

  Fly   613 CIFFVSLFTTFTAMMPTILTFPTEMSVFVREHLNYWYSLKAFYFAKTIAD-MPFQIVFSSVYVLV 676
            .:|||:....|:: :..|..|..|..:|:.|:::.:|.|.|::|||...| :|.:.:.|.::..|
 Frog   450 SLFFVTTNQCFSS-VSAIELFIVEKKIFIHEYISGYYRLSAYFFAKLFTDLLPMRTLPSIIFTSV 513

  Fly   677 VYYLTSQPMELER--VSMFVLICVLNSLVAQSLGLLIGAGMN-IETGVFLGPVTTIPTILFSGFF 738
            :|::.........  ..||.|:.:  :..|.|:.|.:.||.: :.....|..:..:..|:|||..
 Frog   514 IYFMIGFKATAGAFFTMMFTLMMI--AYTAASMALAVAAGQDVVAVANLLMTICFVFMIIFSGLL 576

  Fly   739 VNFDTIPGYLQWVTYVSYVRYGFEGAMVAIYGMDRAKMQ-CNQM--------YCHYRVP------ 788
            ||..::..::.|:.|.|..|||    :.|:...:...:. ||.:        .|....|      
 Frog   577 VNLTSVMDWISWLKYFSIPRYG----LTALQINEFTNLNFCNGLNTTIQGNPNCTGSSPFGTCTG 637

  Fly   789 KKFLEEMSMDNALF--WVDAVAL---IGIFFALRIIAYFVLRWKLHMIR 832
            :::|....:|.:.:  |.:.:||   |.||..   |||.    ||:.::
 Frog   638 EEYLTVQGIDFSTWGLWQNHLALACMIAIFLT---IAYL----KLYFMK 679

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtetNP_001097079.1 3a01204 137..825 CDD:273361 198/748 (26%)
ABCG_EPDR 142..366 CDD:213180 85/253 (34%)
ABC2_membrane 564..767 CDD:279410 53/206 (26%)
abcg2XP_012819987.2 3a01204 73..675 CDD:273361 188/702 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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