DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atet and Abca14

DIOPT Version :9

Sequence 1:NP_001097079.1 Gene:Atet / 33636 FlyBaseID:FBgn0020762 Length:832 Species:Drosophila melanogaster
Sequence 2:XP_017167760.1 Gene:Abca14 / 67928 MGIID:2388708 Length:1719 Species:Mus musculus


Alignment Length:841 Identity:168/841 - (19%)
Similarity:297/841 - (35%) Gaps:273/841 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 GEITAIMGPSGAGKSTLMNILAG-YKTAQLSGSVLINSKE--RNLRRFRKLSCYIMQDDVLIANL 237
            |:||.::|.:||||:|.::||.| |...:  |.|.|:..:  .::.:.||......|||:|...|
Mouse   585 GQITVLLGHNGAGKTTTLSILTGLYLPTR--GKVYISGYDISSDMVQIRKSLGLCPQDDLLFPML 647

  Fly   238 TVREAMMVAANLKLGKNMISYAKVVVVEEILETIGLKESVNTLTCNLSGGQRKRLSIALELVNNP 302
            ||.|.:.....:| |..:.:.::  ....:|.:.||.:..||::.:||||.:::|||.:.|:.:.
Mouse   648 TVSEHLHFYCVIK-GIPLQNQSR--ETNRMLTSFGLLQQSNTMSKDLSGGMKRKLSIIIALIGDT 709

  Fly   303 PVMFFDEPTSGLDSSTCFQLISLLRSLARGGRTIVCTIHQPSARLFEKFDHLYLLAQG--QCVYE 365
            .|:..||||||:|..:......||:...:....::.|.|...|.:..  |.:.:|..|  :|.  
Mouse   710 KVVILDEPTSGMDPVSRRATWDLLQHYKKDRTILLTTHHMDEADVLG--DRIAILVMGILKCC-- 770

  Fly   366 GRVKGLVPYLSSL---GYECPSYHNP-----------ADYV----LEV-ASGEYGDAVPKLVDAV 411
                |...:|..|   ||.......|           .:|:    :|. .:.|....:|      
Mouse   771 ----GSSLFLKKLYGVGYHLVIVKTPDSNDEKIFQLIKNYIPTAKMETNVAAELSFILP------ 825

  Fly   412 KSGACKKYAHK--DYVLTLAQKGCNNDIIKGSGSGAENAMAILTLED---EKPPLEDRQLEPSIP 471
                 |::.|:  :....|.:|   .:.:..||.|    :::.|:::   :...|||.:|.    
Mouse   826 -----KEHTHRFAELFTDLEEK---QEELGISGFG----VSMTTMDEVFFKVSNLEDLKLN---- 874

  Fly   472 VDDPAELKPPKLETQQSQNSDCSVVNMPTNAVDDSCSFSSSKGTQNAVGGSGSGGPS-------- 528
                .|:.|......||.|.|...:|:|.|       |.....::..:..|.:.|.|        
Mouse   875 ----TEIAPSASIVSQSSNEDNQNMNVPRN-------FERPGYSRRHLDSSFNAGWSLYIQQFRA 928

  Fly   529 ---------------------AVVGCMTSLLDSHE-SVVTLPNK-----------TGFPTSGWTQ 560
                                 |::|.|..|:.... ||...|.:           ..|..||...
Mouse   929 MFIKRVMFSWRYWKLLLLQLLALLGLMYLLIKGISFSVPKEPARVMDLEQYGETIVPFSVSGDPN 993

  Fly   561 FWILLKRSFRTILRDK--------------MLTHMRLFSHVIVG--------------------- 590
            ...:|.::..|:|:.|              :||........||.                     
Mouse   994 LTQILTKNLETMLKAKKQKIHEVQGDMKNYLLTSKDCIYSCIVAFSLDVTTEEKTFIFWFNNEAY 1058

  Fly   591 -------AIIGMIYY-----------------------DVGNEAS----KIMSNAGCIFFVSLFT 621
                   :|:..|.|                       |..||.|    :|:.|  .:|.:|:||
Mouse  1059 HAAPLSLSILDNIIYKYLSGPDATITVSNNPQPQRVTKDKSNERSISGIQIVFN--LLFGMSIFT 1121

  Fly   622 TFTAMMPTILTFPTEMSVFVREHLNY---WYSLKAFYFAKTIADMPFQIVFSSVYVLVVYYLTSQ 683
            :...:|..     || .|...:|:.:   .|:|. |:.:..:.|:....| :.|.:|||:..|..
Mouse  1122 SGFCLMTV-----TE-RVSKAKHIQFVSGVYTLN-FWLSALLWDLIIHFV-ACVLLLVVFLYTDV 1178

  Fly   684 PMELERV----SMFVLICVLNSLVAQSLGLLIGAGMNIETGVFLGPVTTIPTILFSGFFVNFDTI 744
            .:.||:.    :||:|             :|.|..:             ||.|....|:.|..| 
Mouse  1179 DILLEKYHFLDTMFIL-------------MLFGWSI-------------IPFIYLLSFWYNNST- 1216

  Fly   745 PGYLQ------WVTYVSYV---------------------------RYGFEGAMVAIYGMDRAKM 776
            ..|::      .:.::|.:                           .|.|..::...|.:...:.
Mouse  1217 NAYIKIFVFNHCLGFISIIVDAVVQIIPDIKTSTKNLILNSMLLLPIYNFGMSIYKYYNIHEIRK 1281

  Fly   777 QCNQMYCHYRVPKKFLEEMSMDNALF---------WVDAVALIGIFFALRIIAYFVLRWKL 828
            .|:.:.....:|.  .:...:|..::         .|.|:|..|:.:.:.||......|.|
Mouse  1282 LCSSLGYINTIPS--CKSQIIDIPIYSMNQKAIGRHVTAMAATGLIYFILIILLETTSWNL 1340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtetNP_001097079.1 3a01204 137..825 CDD:273361 166/836 (20%)
ABCG_EPDR 142..366 CDD:213180 58/194 (30%)
ABC2_membrane 564..767 CDD:279410 53/311 (17%)
Abca14XP_017167760.1 rim_protein <128..1709 CDD:130324 168/841 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.