DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atet and st

DIOPT Version :9

Sequence 1:NP_001097079.1 Gene:Atet / 33636 FlyBaseID:FBgn0020762 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster


Alignment Length:829 Identity:199/829 - (24%)
Similarity:345/829 - (41%) Gaps:206/829 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 KSPNRVSDSAATTAPNAVLYTSGNMSLSTLSTGSGNPNPNPNASTNSRQEPVPLLSQLKLTNDLK 90
            ::|.||........|..          ||:...|.:..|. .:..||.:..:||.|..| .:..:
  Fly    12 EAPERVEQHELQVMPVG----------STIEVPSLDSTPK-LSKRNSSERSLPLRSYSK-WSPTE 64

  Fly    91 QNSHGSQNNLCNGGLGSNNHALAPKVANNSGGSPNGQKKGTIALSHLPQRPPVDIEFCDISYSVT 155
            |.:.....:||              |..|.|||  ||:                           
  Fly    65 QGATLVWRDLC--------------VYTNVGGS--GQR--------------------------- 86

  Fly   156 DSHRRGFKTILKSVSGKFRNGEITAIMGPSGAGKSTLMNILAGYKTA--QLSGSVLINSKERNLR 218
                  .|.|:.:.:|..:.|.:.|:||.||:||:|||:.||..:.|  .:.|.:|||.  |.:.
  Fly    87 ------MKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILING--RRIG 143

  Fly   219 RF-RKLSCYIMQDDVLIANLTVREAMMVAANLKLGKNMISYAKVVVVEEILETIGLKESVNTLTC 282
            .| .::|.|:.|||:.:.:|||.|.:...|:|:|.:.:....:.::::|:||..||..:..|...
  Fly   144 PFMHRISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIG 208

  Fly   283 N------LSGGQRKRLSIALELVNNPPVMFFDEPTSGLDSSTCFQLISLLRSLARGGRTIVCTIH 341
            :      ||||:||||:.|:||:|||.::|.||||:||||.:..||::.|..||:.|.||:||||
  Fly   209 SGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTIH 273

  Fly   342 QPSARLFEKFDHLYLLAQGQCVYEGRVKGLVPYLSSLGYECPSYHNPADYVLEVASGEYG----- 401
            |||::||:.|:::.|||.|:..:.|..:..:.:.::.||.||..:||||:::.|.:.:.|     
  Fly   274 QPSSQLFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADFLIGVLATDPGYEQAS 338

  Fly   402 -DAVPKLVD--AVKSGACKKYAHKDYVLTLAQKGCNNDIIKGSGSGAENAMAILTLEDEKPPLED 463
             .:...|.|  ||.|.|.::....:..:.:||.|                               
  Fly   339 QRSAQHLCDQFAVSSAAKQRDMLVNLEIHMAQSG------------------------------- 372

  Fly   464 RQLEPSIPVDDPAELKPPKLETQQSQNSDCSVVNMPTNAVDDSCSFSSSKGTQNAVGGSGSGGPS 528
                 :.|.|...|                                 |.:|              
  Fly   373 -----NFPFDTEVE---------------------------------SFRG-------------- 385

  Fly   529 AVVGCMTSLLDSHESVVTLPNKTGFPTSGWTQFWILLKRSFRTILRDKMLTHMRLFSHVIVGAII 593
                                      .:.:.:|.::..|:..|:|||..:..:|....:.:..||
  Fly   386 --------------------------VAWYKRFHVVWLRASLTLLRDPTIQWLRFIQKIAMAFII 424

  Fly   594 GMIYYDVGNEASKIMSNA--GCIFFVSLFTTFTAMMPTILTFPTEMSVFVREHLNYWYSLKAFYF 656
            |..:... .|.|::...|  |.:|.:....|:..|...:..||....:|:||..:..||...:|.
  Fly   425 GACFAGT-TEPSQLGVQAVQGALFIMISENTYHPMYSVLNLFPQGFPLFMRETRSGLYSTGQYYA 488

  Fly   657 AKTIADMPFQIVFSSVYVLVVYYLTSQPMELERVSMFVLICVLNSLVAQSLGLLIGAGMNIETGV 721
            |..:|.:|..|:...::|::.|:||..........:..:..||...||.:.|.......|   .|
  Fly   489 ANILALLPGMIIEPLIFVIICYWLTGLRSTFYAFGVTAMCVVLVMNVATACGCFFSTAFN---SV 550

  Fly   722 FLGPVTTIPT----ILFSGFFVNFDTIPGYLQWVTYVSYVRYGFEGAMVAIYGMDRAKMQCNQ-- 780
            .|.....:|.    ::.||.|:..:::|....|..::|::.|..| ||.|........:.|.|  
  Fly   551 PLAMAYLVPLDYIFMITSGIFIQVNSLPVAFWWTQFLSWMLYANE-AMTAAQWSGVQNITCFQES 614

  Fly   781 --MYCHYRVPKKFLEEMSMDNALFWVDAVALIGIFFALRIIAYFVLRWK 827
              :.| :...:..|::.|.:.:..:.:.:|::|::|...::.|:.| |:
  Fly   615 ADLPC-FHTGQDVLDKYSFNESNVYRNLLAMVGLYFGFHLLGYYCL-WR 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtetNP_001097079.1 3a01204 137..825 CDD:273361 173/714 (24%)
ABCG_EPDR 142..366 CDD:213180 86/232 (37%)
ABC2_membrane 564..767 CDD:279410 51/208 (25%)
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 95/282 (34%)
3a01204 67..665 CDD:273361 184/762 (24%)
ABC2_membrane 395..600 CDD:279410 51/209 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438918
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 1 1.000 - - mtm14984
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR48041
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
76.840

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