DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atet and Abca15

DIOPT Version :9

Sequence 1:NP_001097079.1 Gene:Atet / 33636 FlyBaseID:FBgn0020762 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_796187.2 Gene:Abca15 / 320631 MGIID:2388709 Length:1668 Species:Mus musculus


Alignment Length:840 Identity:168/840 - (20%)
Similarity:314/840 - (37%) Gaps:246/840 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 KTILKSVSGKFRNGEITAIMGPSGAGKSTLMNILAG-YKTAQLSGSVLINSKE--RNLRRFRKLS 224
            |..:|.:|.....|::|.::|.:||||||.::||:| |...  ||...::.::  :::.:.|...
Mouse   538 KVAIKDLSLNLYEGQVTVLLGHNGAGKSTTLSILSGLYPPT--SGEAYVHGEDISQHMDQVRNSL 600

  Fly   225 CYIMQDDVLIANLTVREAMMVAANLKLGKNMISYAKVVVVEE---ILETIGLKESVNTLTCNLSG 286
            ....|.::|..:|||.|.:.....:|      ...:.:.:||   :|....|.|..:..:.:|||
Mouse   601 GLCPQQNLLFDHLTVSEHLYFYCRIK------GVPQKMYLEETNNMLSAFNLMEKCDAFSKSLSG 659

  Fly   287 GQRKRLSIALELVNNPPVMFFDEPTSGLDSSTCFQLISLLRSLARGGRTIVCTIH-QPSARLFEK 350
            |.:::|:|.:.|:....|...||||||:|.::......:|::. :..|||:.|.| ...|.:.. 
Mouse   660 GMKRKLAIIIALIGGSKVAILDEPTSGMDPASRRSTWDILQTY-KQNRTILLTTHYMDEADVLG- 722

  Fly   351 FDHLYLLAQG--QC----VYEGRVKGL--------VPY--LSSLGYECPSYHNPADYVLEVASG- 398
             |.:.::.:|  :|    |:..|:.|:        .||  ::.:.....||...|  .||...| 
Mouse   723 -DRIAIMVRGTLRCCGSSVFLKRLYGVGSHLVMVKEPYCDIAEISKLIHSYVPTA--TLETNVGN 784

  Fly   399 EYGDAVPKLVDAVKSGACKKYAHK-DYVLTLAQKGCNNDIIKGSG----SGAENAMAILTLEDEK 458
            |....:|           |:|.|: :.:.|..::...|..|...|    :..|..:.:..|||.|
Mouse   785 ELSFILP-----------KEYTHRFEALFTALEENQENLGISSFGVSITTMEEVFLKVSNLEDSK 838

  Fly   459 PPLEDRQLEPSIPVDDPAELKPPKLETQQSQNSDCSV---VNMPTNAVDDSCSFSSSKGTQNAVG 520
            ..:|..|              .|.:.::.::|.|...   |..||.:.|           ||.|.
Mouse   839 TDIEATQ--------------SPSVGSKGNKNGDVESSGRVGFPTQSED-----------QNIVF 878

  Fly   521 GSG-----------------------SGGPSAVVGCMTS---LLDSHE---SVVTLPN-----KT 551
            .:|                       .|....::|.:.|   ||.|||   ..:...|     :|
Mouse   879 NTGCSLYLQQFRAMFMKRLMYNWRNWRGILVQILGLIISTFLLLKSHEFRYKKIRQMNLDEYGQT 943

  Fly   552 GFPTSGWTQFWILLKRSFRTILRDKMLTHMRLF----SHVIVGAIIGMIYYDVGNE--------- 603
            ..|.|.|.          ::.|...:|||:...    :|.:......::.|..||:         
Mouse   944 IVPFSIWG----------KSNLTSSLLTHLENMLKPGNHQLKEVQGDLLKYLEGNDECVHLCVIA 998

  Fly   604 -ASKIMSN----------------------AGCIFFVSL------FTTFTAMMPT---------- 629
             :.|:::|                      ...|.|:||      .|.|....|:          
Mouse   999 LSIKVVANRVNLTVLFNNEAYHSPSLSLTVLDNILFMSLSGSDASITVFNKPQPSPQRKEWPGST 1063

  Fly   630 ---ILTFPTEMSVFV----------------REHLNY--WYSLKAFYFAKTIADMPFQIVF--SS 671
               |:.|..::.:.:                .:|:.:  ..|:..::.:..:.|:   |:|  |.
Mouse  1064 DGKIVAFKIQLGMALLVSGFCILTVTERHNKTKHMQFLSGVSILVYWLSALVFDL---IIFFISC 1125

  Fly   672 VYVLVVY-------YLTSQP-------MELERVSMFVLICVLNSLVAQS----LGLLIGAGMNIE 718
            .::||::       |:|...       :.|...|...|..:|:.|.::|    :.||:...::..
Mouse  1126 CFLLVMFKYCKFDIYVTDYHILDTMLILTLFGWSAIPLTYLLSFLFSKSNSAYINLLVFCYLSGT 1190

  Fly   719 TGVFLGPV--TTIPTILFSG---FFVNFDTIPGYLQWVTYVSYVRYGFEGAMVAIYG-MDRAKMQ 777
            ..:.:..:  ..|.||:.:.   |.:|           ..:.:..|.. |..::.|. :.|.||.
Mouse  1191 LSLLMDTIIEARISTIMSNSTQTFLLN-----------ALLLFPMYNL-GKCISEYTVIYRKKML 1243

  Fly   778 CNQ-------MYCHYRVPKKFLEEMSMDNALFWVDAVALIGIFFALRIIAYFVLRWKLHM 830
            |.|       :.|..:..||.:..:.......::.|:::.|..|.|.|..:..:.||:.|
Mouse  1244 CIQQKNALKYLNCSNKHTKKNIYSLKKPMLGKYLIAMSIAGFVFLLLIFFWENISWKVKM 1303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtetNP_001097079.1 3a01204 137..825 CDD:273361 165/833 (20%)
ABCG_EPDR 142..366 CDD:213180 57/215 (27%)
ABC2_membrane 564..767 CDD:279410 44/300 (15%)
Abca15NP_796187.2 ABC2_membrane_3 144..464 CDD:289468
ABC2_membrane <267..383 CDD:304374
CcmA 522..831 CDD:224054 77/316 (24%)
ABC_subfamily_A 522..743 CDD:213230 57/215 (27%)
ABC2_membrane_3 <1009..1231 CDD:289468 34/236 (14%)
CcmA 1354..1648 CDD:224054
ABC_subfamily_A 1354..1575 CDD:213230
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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