DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Atet and Abca4

DIOPT Version :9

Sequence 1:	NP_001097079.1	Gene:	Atet / 33636	FlyBaseID:	FBgn0020762	Length:	832	Species:	Drosophila melanogaster
Sequence 2:	NP_001101191.1	Gene:	Abca4 / 310836	RGDID:	1309445	Length:	2290	Species:	Rattus norvegicus

Alignment Length:	198	Identity:	70/198 - (35%)
Similarity:	107/198 - (54%)	Gaps:	12/198 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly   173 FRNGEITAIMGPSGAGKSTLMNILAGYKTAQLSGSVLINSK--ERNLRRFRKLSCYIMQDDVLIA 235
            |...:|||.:|.:||||:|.::||.|. ....||:|||..|  |.:|...|:......|.::|..
  Rat   931 FYENQITAFLGHNGAGKTTTLSILTGL-LPPTSGTVLIGGKDIEISLDAVRQSLGMCPQHNILFH 994

  Fly   236 NLTVREAMMVAANLKLGKNMISYAKV-VVVEEILETIGLKESVNTLTCNLSGGQRKRLSIALELV 299
            :|||.|.::..|.|| |:   |:.:. :.:|.:||..||....|....:||||.:::||:|:..|
  Rat   995 HLTVAEHILFYAQLK-GR---SWEEARLEMEAMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFV 1055

  Fly   300 NNPPVMFFDEPTSGLDSSTCFQLISLLRSLARGGRTIV-CTIHQPSARLFEKFDHLYLLAQGQCV 363
            .:..|:..||||||:|..:...:..||... |.||||: .|.|...|.|..  |.:.:::||:..
  Rat  1056 GDSKVVVLDEPTSGVDPYSRRSIWDLLLKY-RSGRTIIMSTHHMDEADLLG--DRIAIISQGRLY 1117

  Fly   364 YEG 366
            ..|
  Rat  1118 CSG 1120

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Atet	NP_001097079.1	3a01204	137..825	CDD:273361	70/198 (35%)
		ABCG_EPDR	142..366	CDD:213180	69/196 (35%)
		ABC2_membrane	564..767	CDD:279410
Abca4	NP_001101191.1	rim_protein	1..2249	CDD:130324	70/198 (35%)
		ABC_subfamily_A	907..1126	CDD:213230	70/198 (35%)
		ABC_subfamily_A	1915..2135	CDD:213230
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	1	1.000