DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atet and abcx-1

DIOPT Version :9

Sequence 1:NP_001097079.1 Gene:Atet / 33636 FlyBaseID:FBgn0020762 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_495321.3 Gene:abcx-1 / 183860 WormBaseID:WBGene00006522 Length:710 Species:Caenorhabditis elegans


Alignment Length:754 Identity:138/754 - (18%)
Similarity:260/754 - (34%) Gaps:200/754 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 ANNSGGSPNGQKKGTI------ALSHLPQRPPVDIEFCDISYSVTDSHRRGFKTILK-------- 167
            |:....:...:|||.|      .::....||..::....:|:| .|......|.:|:        
 Worm    37 ADMQNHNTQNEKKGIIRYLEYYEINSQSTRPYPNLLLNKLSFS-KDLRSSSDKVLLRLPVLKQEV 100

  Fly   168 -SVSGKFRNGEITAIMGPSGAGKSTLMNILAGYK--TAQLSGSVLINSKERNLRRFRKLSCYIMQ 229
             ::|.:..:.::.|||....:...:|:.|:.|.|  ..:|||.:|:|....:..|..|...::..
 Worm   101 HNISFELSSSDVLAIMYTKESETISLLKIICGIKDVRGKLSGDILVNGHRMSRDRLEKTIGFVSL 165

  Fly   230 DDVLIANLTVREAMMVAANLKLGKNMISYAKVV--------VVEEILETIGLKESVNTLTCNLSG 286
            :.. .:.|:||:.:.|..|.        |..:.        ::.:::..:||....:.:...|:.
 Worm   166 ESP-TSTLSVRQYLHVHGNF--------YPPMTERYGGVGHLINKLMTDLGLFPVSDIICSRLNR 221

  Fly   287 GQRKRLSIALELVNNPPVMFFDEPTSGLD-SSTCFQLISLLRSLA-RGGRTIVCTIHQPSARLFE 349
            .|.:|:.:|.:||.:|.::...:....:| ...|| ||..||..| :..|.::..|...|.::..
 Worm   222 SQWQRVKVASQLVRDPTILVCSDIFKDIDVHDQCF-LIDYLREWAVKTNRIVIMAISPTSLQILN 285

  Fly   350 KFDHLYLLAQGQCVYEGRVKGLVPYLSSLGYECPSYHNPADYVLEV---------ASGEYGDAVP 405
            .|....:||.|:.:|.|..|.:..|..::|..||.|.|..||.:::         ||.|....:.
 Worm   286 MFSKAMILASGRMIYFGPPKSMQQYFETIGCPCPPYKNVCDYYVDLVTHDNLTSDASRESSVRIA 350

  Fly   406 KLVDAVKSGA--CKKYAHKDYVLTLAQKGCNNDIIKGSGSGAENAMAILTLEDEKPPLEDRQLEP 468
            :||:.....|  .::.|...::|.|...|.              .|.:|||              
 Worm   351 RLVNKWNQTAPPVRRTASGKFLLDLPTAGI--------------FMNLLTL-------------- 387

  Fly   469 SIPVDDPAELKPPKLETQQSQNSDCSVVNMPTNAVDDSCS------FSSSKGTQNAVGGSGSGGP 527
                                      :.....|.:::..|      |..|..|            
 Worm   388 --------------------------ISLFWFNFINNRASRIFFLLFIFSLST------------ 414

  Fly   528 SAVVGCMTSLLDSHESVVTLPNKTGFPTSGWTQFWILLKRSFRTILRDKMLTHMRLFS--HVIVG 590
                 |::  |...:..:|||: .....:.:.:..|.....|..::..|..|.:..|.  ::.:.
 Worm   415 -----CLS--LHLSDLSLTLPD-AFLNRNSYLELLIFYVPLFIGLVNLKKCTFLSEFDKFYLFIS 471

  Fly   591 AIIGMIYYDVGNEASKI-----MSNAGCIFFVSLFTTFTAMMPTILTFPTEMSVFV------REH 644
            |...:      .|..|:     |.::..|..||.......::.|.:.|...||:|.      ..|
 Worm   472 ARHHL------KELLKLSPLKNMCSSLSIIIVSFVVELPFLLITSMVFAMPMSIFTDFHQKSSNH 530

  Fly   645 LNYWYSLKAFYF------------AKTIADMPFQIVFSSVYVLVVYYLTSQPMELERV------S 691
            |....|:.:.:|            ...::..|....|..:....:::....|..:..:      .
 Worm   531 LTSLVSISSSFFINLSVTQLVVNSVSNLSSEPLSFFFFVISWFSLFFACGFPFPIHSILKYFNPL 595

  Fly   692 MFVLICVLNSLVAQSLGLLIGAGMNIETGVFL---------------GP---VTTIPTILFSGFF 738
            .|....|...|...|..|.....:|:.|.:.|               ||   |::...:.:.||.
 Worm   596 FFPTTSVFRFLYEDSPSLYPQLSVNLSTPIQLYSCGRTFLNTTQVTRGPCQKVSSFELLSYYGFN 660

  Fly   739 VNFDT-------------IPGYLQW---VTYVSYVRYGF 761
            .:||.             |..||.:   :.:||.|.:.|
 Worm   661 ESFDKQKSIFHGILISNFIFNYLFFSILILFVSCVLFHF 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtetNP_001097079.1 3a01204 137..825 CDD:273361 133/728 (18%)
ABCG_EPDR 142..366 CDD:213180 51/244 (21%)
ABC2_membrane 564..767 CDD:279410 45/263 (17%)
abcx-1NP_495321.3 P-loop_NTPase 102..302 CDD:304359 46/209 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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