DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atet and wht-3

DIOPT Version :10

Sequence 1:NP_523471.2 Gene:Atet / 33636 FlyBaseID:FBgn0020762 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_497825.2 Gene:wht-3 / 175528 WormBaseID:WBGene00007631 Length:614 Species:Caenorhabditis elegans


Alignment Length:696 Identity:165/696 - (23%)
Similarity:292/696 - (41%) Gaps:165/696 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 KTILKSVSGKFRNGEITAIMGPSGAGKSTLMNIL--AGYKTAQLSGSVLIN----SKERNLRRFR 221
            |.:|..|||..:.||:.|:||.|||||:||||:|  ...|..:.:|:|.:|    .||.:|    
 Worm    58 KQLLNRVSGIAKPGEMVALMGASGAGKTTLMNVLMCRNMKGLEKNGTVKVNGTKIGKEISL---- 118

  Fly   222 KLSCYIMQDDVLIANLTVREAMMVAANLKLGKNMISYAKVVVVEEILETIGLKE----SVNT--L 280
             :|.:..|.::.|..|||.|.:|:.|.|::..|  .:.:...|:||:|.:.|:.    .:.|  |
 Worm   119 -ISGFAQQQEIFIPTLTVDEYLMIQARLRMKAN--KHTRRERVDEIIEMLRLQNCRDLKIGTPGL 180

  Fly   281 TCNLSGGQRKRLSIALELVNNPPVMFFDEPTSGLDSSTCFQLISLLRSLARGGRTIVCTIHQPSA 345
            ...:|||:.:||:.|.||::||.::|.|||||||||.....::.:|::||..|||:   ||||:|
 Worm   181 VKGISGGEARRLTFACELLSNPSLLFADEPTSGLDSFMAASVVQILKNLANSGRTL---IHQPTA 242

  Fly   346 RLFEKFDHLYLLAQGQCVYEGRVKGLVPYLSSLGYECPSYHNPADYVL---------EVASGEYG 401
            .||.:||.:..|:.|:..:.|.....|.:.:..|:..|...||.:::.         |..|.|  
 Worm   243 ELFFQFDKIIFLSMGKTAFMGTPHESVKFFADCGHPIPKLFNPPEWIQSKLSVIPNNETKSRE-- 305

  Fly   402 DAVPKLVDAVKSGACKKYAHKDYVLTLAQKGCNNDIIKGSGSGAENAMAILTLEDEKPPLEDRQL 466
             .:.|:::..:    |...|:..::.:                    ..|.|.|           
 Worm   306 -TIGKIIEFYE----KSIIHQKSIVEI--------------------RVIATTE----------- 334

  Fly   467 EPSIPVDDPAELKPPKLETQQSQNSDCSVVNMPTNAVDDSCSFSSSKGTQNAVGGSGSGGPSAVV 531
                        .||.:|                                               
 Worm   335 ------------LPPYIE----------------------------------------------- 340

  Fly   532 GCMTSLLDSHESVVTLPNKTGFPTSGWTQFWILLKRSFRTILRDKMLTHMRLFSHVIVGAIIGMI 596
                             |...|..:|     .||||:...::|......|:|...|::|..||.:
 Worm   341 -----------------NPGFFAETG-----ALLKRACLDVIRSPAQMRMKLIQKVVMGLFIGSL 383

  Fly   597 YYDVGNEASKIMSNAGCIFFVSLFTTFTAMMPTILTFPTEMSVFVREHLNYWYSLKAFYFAKTIA 661
            |:....:...:.:....::|:....||:.|...:.....|:.:..||:.:..:.:.::|.::.::
 Worm   384 YWQQPLDPRGVRNTNSALYFLIAELTFSTMFGIMTFMEHELPLIAREYHDGLFYVISYYISRFLS 448

  Fly   662 DMPFQIVFSSVYVLVVYYLTSQPMELERVSMFVLICVLNSLVAQSLGLLIGAGMNIETGVFLGPV 726
            .:|...:..::.:::.|::.......::|:..:||.||....|.|.||.:..  ..|| ..|...
 Worm   449 YLPLFTIDGALMIVISYWMIGLNSTWQQVAKSILISVLVEQSATSCGLFLAC--LFET-TSLAIA 510

  Fly   727 TTIPT----ILFSGFFVNFDTIPGYLQWVTYVSYVRYGFEGAMVAIYG-MDRAKMQCNQMYCHYR 786
            ..:|.    .|.||.:.|.:..|.|::|:.:.|:.||||||.:|..:. :|..|..     ..||
 Worm   511 FAVPASGLFALLSGLYGNTNNFPVYIRWMQWTSWCRYGFEGLVVNQWSQVDNPKWD-----PFYR 570

  Fly   787 VPKKFLEEMSMDNALFWVDAVALIGIFFALRIIAYFVLRWKLHMIR 832
              :..|::.|.:...:.:|.:.|..|.....:..|..|..::.:.|
 Worm   571 --ELILKQFSFNKDNYQLDVIGLCSIVIFFYLAGYIALFIRIRLSR 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtetNP_523471.2 3a01204 137..825 CDD:273361 163/687 (24%)
wht-3NP_497825.2 3a01204 37..614 CDD:273361 164/694 (24%)

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