DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atet and wht-3

DIOPT Version :9

Sequence 1:NP_001097079.1 Gene:Atet / 33636 FlyBaseID:FBgn0020762 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_497825.2 Gene:wht-3 / 175528 WormBaseID:WBGene00007631 Length:614 Species:Caenorhabditis elegans


Alignment Length:696 Identity:165/696 - (23%)
Similarity:292/696 - (41%) Gaps:165/696 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 KTILKSVSGKFRNGEITAIMGPSGAGKSTLMNIL--AGYKTAQLSGSVLIN----SKERNLRRFR 221
            |.:|..|||..:.||:.|:||.|||||:||||:|  ...|..:.:|:|.:|    .||.:|    
 Worm    58 KQLLNRVSGIAKPGEMVALMGASGAGKTTLMNVLMCRNMKGLEKNGTVKVNGTKIGKEISL---- 118

  Fly   222 KLSCYIMQDDVLIANLTVREAMMVAANLKLGKNMISYAKVVVVEEILETIGLKE----SVNT--L 280
             :|.:..|.::.|..|||.|.:|:.|.|::..|  .:.:...|:||:|.:.|:.    .:.|  |
 Worm   119 -ISGFAQQQEIFIPTLTVDEYLMIQARLRMKAN--KHTRRERVDEIIEMLRLQNCRDLKIGTPGL 180

  Fly   281 TCNLSGGQRKRLSIALELVNNPPVMFFDEPTSGLDSSTCFQLISLLRSLARGGRTIVCTIHQPSA 345
            ...:|||:.:||:.|.||::||.::|.|||||||||.....::.:|::||..|||:   ||||:|
 Worm   181 VKGISGGEARRLTFACELLSNPSLLFADEPTSGLDSFMAASVVQILKNLANSGRTL---IHQPTA 242

  Fly   346 RLFEKFDHLYLLAQGQCVYEGRVKGLVPYLSSLGYECPSYHNPADYVL---------EVASGEYG 401
            .||.:||.:..|:.|:..:.|.....|.:.:..|:..|...||.:::.         |..|.|  
 Worm   243 ELFFQFDKIIFLSMGKTAFMGTPHESVKFFADCGHPIPKLFNPPEWIQSKLSVIPNNETKSRE-- 305

  Fly   402 DAVPKLVDAVKSGACKKYAHKDYVLTLAQKGCNNDIIKGSGSGAENAMAILTLEDEKPPLEDRQL 466
             .:.|:::..:    |...|:..::.:                    ..|.|.|           
 Worm   306 -TIGKIIEFYE----KSIIHQKSIVEI--------------------RVIATTE----------- 334

  Fly   467 EPSIPVDDPAELKPPKLETQQSQNSDCSVVNMPTNAVDDSCSFSSSKGTQNAVGGSGSGGPSAVV 531
                        .||.:|                                               
 Worm   335 ------------LPPYIE----------------------------------------------- 340

  Fly   532 GCMTSLLDSHESVVTLPNKTGFPTSGWTQFWILLKRSFRTILRDKMLTHMRLFSHVIVGAIIGMI 596
                             |...|..:|     .||||:...::|......|:|...|::|..||.:
 Worm   341 -----------------NPGFFAETG-----ALLKRACLDVIRSPAQMRMKLIQKVVMGLFIGSL 383

  Fly   597 YYDVGNEASKIMSNAGCIFFVSLFTTFTAMMPTILTFPTEMSVFVREHLNYWYSLKAFYFAKTIA 661
            |:....:...:.:....::|:....||:.|...:.....|:.:..||:.:..:.:.::|.::.::
 Worm   384 YWQQPLDPRGVRNTNSALYFLIAELTFSTMFGIMTFMEHELPLIAREYHDGLFYVISYYISRFLS 448

  Fly   662 DMPFQIVFSSVYVLVVYYLTSQPMELERVSMFVLICVLNSLVAQSLGLLIGAGMNIETGVFLGPV 726
            .:|...:..::.:::.|::.......::|:..:||.||....|.|.||.:..  ..|| ..|...
 Worm   449 YLPLFTIDGALMIVISYWMIGLNSTWQQVAKSILISVLVEQSATSCGLFLAC--LFET-TSLAIA 510

  Fly   727 TTIPT----ILFSGFFVNFDTIPGYLQWVTYVSYVRYGFEGAMVAIYG-MDRAKMQCNQMYCHYR 786
            ..:|.    .|.||.:.|.:..|.|::|:.:.|:.||||||.:|..:. :|..|..     ..||
 Worm   511 FAVPASGLFALLSGLYGNTNNFPVYIRWMQWTSWCRYGFEGLVVNQWSQVDNPKWD-----PFYR 570

  Fly   787 VPKKFLEEMSMDNALFWVDAVALIGIFFALRIIAYFVLRWKLHMIR 832
              :..|::.|.:...:.:|.:.|..|.....:..|..|..::.:.|
 Worm   571 --ELILKQFSFNKDNYQLDVIGLCSIVIFFYLAGYIALFIRIRLSR 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtetNP_001097079.1 3a01204 137..825 CDD:273361 163/687 (24%)
ABCG_EPDR 142..366 CDD:213180 82/214 (38%)
ABC2_membrane 564..767 CDD:279410 49/206 (24%)
wht-3NP_497825.2 ABCG_EPDR 36..263 CDD:213180 82/214 (38%)
3a01204 37..614 CDD:273361 164/694 (24%)
ABC2_membrane 351..555 CDD:279410 49/206 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.710

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