Protein Alignment Atet and abca1

DIOPT Version :9

• Sequence 1: NP_001097079.1
• Gene: Atet / 33636
• FlyBaseID: FBgn0020762
• Length: 832
• Species: Drosophila melanogaster
• Sequence 2: XP_004910916.1
• Gene: abca1 / 100491942
• XenbaseID: XB-GENE-1001143
• Length: 2311
• Species: Xenopus tropicalis
• Alignment Length: 603
• Identity: 131/603 - (21%)
• Similarity: 229/603 - (37%)
• Gaps: 145/603 - (24%)

  Fly   124 PNGQKKGT--IALSHLPQRPPVDIEFCDISYSVTDSHRRGFKTILKSVSGKFRNGEITAIMGPSG 186
            |:..:||:  :.:...|...|:.:..    .::...:|.|.|..:..::..|..|:||:.:|.:|
 Frog   880 PHTVQKGSSEVCMEEEPSHLPLGVSI----QNLVKIYRNGKKVAVDGLTLNFYEGQITSFLGHNG 940

  Fly   187 AGKSTLMNILAGYKTAQLSGSVLINSKE--RNLRRFRKLSCYIMQDDVLIANLTVREAMMVAANL 249
            |||:|.|:||.|. ....:|:..|..|:  ..|...|:......|.:||...|||.|.:...|.|
 Frog   941 AGKTTTMSILTGL-FPPTTGTAYIMKKDIRTELNSIRQNLGVCPQHNVLFDALTVEEHIWFYARL 1004

  Fly   250 KLGKNMISYAKV-VVVEEILETIGLKESVNTLTCNLSGGQRKRLSIALELVNNPPVMFFDEPTSG 313
            |    .:|..|| ..:|:::..:||.......|..||||.:::||:||..|....|:..||||:|
 Frog  1005 K----GLSEEKVKAEMEQMVNDVGLPHKKKYKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAG 1065

  Fly   314 LDSSTCFQLISLLRSLARGGRTIVCTIHQPSARLFEKFDHLYLLAQGQ--CV------------- 363
            :|..:...:..||....:|...|:.|.|...|.:..  |.:.:::.|:  ||
 Frog  1066 VDPYSRRGIWELLIKYRQGRTIILSTHHMDEADILG--DRIAIISHGKLCCVGSSLFLKNQLGTG 1128

  Fly   364 -YEGRVK--------------GLVPYL---SSLGYECPSYHNPADYVLEVASGEYGDAVPKLVDA 410
             |...||              ..:.||   ||....|..:.:|    :..|....|.....:...
 Frog  1129 YYLTLVKRDNDSSLSSCRNSSSTMSYLKKESSKQTACKQHPSP----MIAAPSASGTTAAVITKH 1189

  Fly   411 VKSGACKKYAHKDYVLTLAQKGCNNDIIKGSGS---------GAENAMAILTLEDEKPP----LE 462
            .|..|.:|...||...:::|...:    .|.||         |..:..||..|.::..|    :|
 Frog  1190 SKHTAGQKKEAKDREDSVSQSSSD----AGLGSDHESDTMTIGLTDVSAISNLINKHVPEARLVE 1250

  Fly   463 D--RQLEPSIP---------------VDDPAELKPPKLETQQSQNSDCSVVNMPTNAVDDS-CSF 509
            |  .:|...:|               :||    :...|.......:|.::..:.....||: ...
 Frog  1251 DIGHELTYVLPYEAAKEGAFVELFHEIDD----RLSDLGISSYGIADTTLEEIFLKVADDTGVDA 1311

  Fly   510 SSSKGT------QNAVGGSGSGGPSAVVGCM-----TSLLDSHESVVTLPNK-----TGFPTSGW 558
            .:|.||      :.|.|...|        |:     ....|:::|.:...::     :|....|.
 Frog  1312 ETSDGTLPARRKRYAFGDHQS--------CLRPFTEDDAFDTNDSDMDPESRETDYLSGIDGKGS 1368

  Fly   559 TQF--WILLKRSFRTILRDKMLTHMR----LFSHVIVGAIIGMIYYDVGNEASKIMSNAGCIFFV 617
            .|.  |.|:::.|..:|..::|...|    .|:.:::.|:                       ||
 Frog  1369 YQLKSWNLMRQQFTALLWKRLLYAKRSRKGFFAQIVLPAV-----------------------FV 1410

  Fly   618 SLFTTFTAMMPTILTFPT 635
            .:...|:.::|....:|:
 Frog  1411 LIALVFSLIVPPFGKYPS 1428

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Atet	NP_001097079.1	3a01204	137..825	CDD:273361	128/588 (22%)
		ABCG_EPDR	142..366	CDD:213180	68/242 (28%)
		ABC2_membrane	564..767	CDD:279410	12/76 (16%)
abca1	XP_004910916.1	rim_protein	1..2272	CDD:130324	131/603 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	1	1.000