DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atet and abcg8

DIOPT Version :9

Sequence 1:NP_001097079.1 Gene:Atet / 33636 FlyBaseID:FBgn0020762 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_001108041.2 Gene:abcg8 / 100136850 ZFINID:ZDB-GENE-050517-41 Length:684 Species:Danio rerio


Alignment Length:678 Identity:169/678 - (24%)
Similarity:307/678 - (45%) Gaps:107/678 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 KTILKSVSGKFRNGEITAIMGPSGAGKSTLMNIL-----AGYKTAQLSGSVLINSKERNLRRFRK 222
            :|::|.::....:|::.|::|.||.||::|::|:     .|   :..||.:|||.|.......:|
Zfish    91 QTVIKDLNLHVHSGQMLAVIGSSGCGKTSLLDIITCRDEGG---SMNSGEILINGKPSTRSLVKK 152

  Fly   223 LSCYIMQDDVLIANLTVREAMMVAANLKLGKNMISYAKVVVVEEILETIGLKESVNTLTCN---- 283
            ...::.|||.|:.:|||||.:...|.|:|..|.....:...|::::..:.|::..:|...|    
Zfish   153 SIAHVRQDDRLLPHLTVRETLAFVAKLRLPANFSQKQRDQRVDDVIAELRLRQCAHTRVGNEYVR 217

  Fly   284 -LSGGQRKRLSIALELVNNPPVMFFDEPTSGLDSSTCFQLISLLRSLARGGRTIVCTIHQPSARL 347
             :|||:|:|:|||::|:.||.::..|||||||||.|...|:..|..||||.|.::.::|||.:.:
Zfish   218 GVSGGERRRVSIAVQLLWNPGILILDEPTSGLDSFTAHNLVITLYRLARGNRLVLLSVHQPRSDI 282

  Fly   348 FEKFDHLYLLAQGQCVYEGRVKGLVPYLSSLGYECPSYHNPADYVLEVASGEYGDAVPKLVD--- 409
            |:.||.:.||:.|..||.|:.|.:|.|.::|||.||.|.||:||.:::.|          :|   
Zfish   283 FQLFDLVVLLSSGSAVYCGQAKDMVSYFTTLGYPCPRYCNPSDYYVDLIS----------IDRRT 337

  Fly   410 AVKSGACKKYAHKDYVLTLAQKGCNNDIIKGSGSGAENAMAILTLEDEKPPLEDRQLEPSIPVDD 474
            ..|...|.:.|                          :.:|...||..|.. ||...:..:    
Zfish   338 PEKEAQCLEKA--------------------------SMLAAQFLEKVKNN-EDFMWKSEV---- 371

  Fly   475 PAELKPPKLETQQSQNSDCSVVNMPTNAVDDSCSFSSSKGTQNAVGGSGSGGPSAVVGCMTSLLD 539
               ..||.||..||        ::|:.::.:|....|.:..|                       
Zfish   372 ---CGPPALEAPQS--------SVPSVSMKESVITVSKQKDQ----------------------- 402

  Fly   540 SHESVVTLPNKTGFPTSGWTQFWILLKRSFRTILRDKMLTHMRLFSHVIVGAIIGMIYYDVGNEA 604
                   ||.|.       .||..|::|......||.:...:.....:::..:||.:|:....|.
Zfish   403 -------LPGKV-------HQFTTLIRRQVFNDYRDLVTLVVHGLEALLMSLLIGFLYFGCTEEG 453

  Fly   605 SKIMSNAGCIFFVSLFTTFTAMMPTILTFPTEMSVFVREHLNYWYSLKAFYFAKTIADMPFQIVF 669
            ..|......::.:...|.|..::..|....:|.::...|..:..||:..::|||.:.::|....|
Zfish   454 LSIQDTVALLYMIGALTPFAVVLDVIAKCHSERAMLYHELEDGMYSVTPYFFAKVLGELPEHCAF 518

  Fly   670 SSVYVLVVYYLTSQPMELERVSMFVLICVLNSLVAQSLGLLIGAGM-NIETGVFLGPVTTIPTIL 733
            :.||.:.:|:|....:..:|..:..|:..|....::|:.|.:.|.: .::|..|:|........|
Zfish   519 TLVYGVPIYWLAGLNVAPDRFLLNFLLVWLTVYCSRSMALFVAAALPTLQTSSFMGNALFTVFYL 583

  Fly   734 FSGFFVNFDTIPGYLQWVTYVSYVRYGFEGAMVAIYGMDRAKMQCNQMYCHYRVPKKFLEEMSMD 798
            .:||.::.:.:.....|.:|:|::|:||||.:...:...|..:....:...:. ..|.:|.|.|:
Zfish   584 TAGFVISLENMWMVASWFSYISFMRWGFEGMLQVQFRGTRIPITIGNLTVEFD-GIKVVEMMKMN 647

  Fly   799 NALFWVDAVALIGIFFALRIIAYFVLRW 826
            ....:...:.||.:.....::.|..|::
Zfish   648 QYPLFSCYLVLIAVSLVFILLYYLSLKF 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtetNP_001097079.1 3a01204 137..825 CDD:273361 168/675 (25%)
ABCG_EPDR 142..366 CDD:213180 75/212 (35%)
ABC2_membrane 564..767 CDD:279410 45/203 (22%)
abcg8NP_001108041.2 3a01204 47..674 CDD:273361 168/675 (25%)
ABCG_White 72..301 CDD:213201 75/212 (35%)
ABC2_membrane 413..617 CDD:279410 45/203 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574367
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.740

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