DRSC/TRiP Functional Genomics Resources

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Protein Alignment bdl and Igdcc4

DIOPT Version :10

Sequence 1:NP_608822.1 Gene:bdl / 33635 FlyBaseID:FBgn0028482 Length:719 Species:Drosophila melanogaster
Sequence 2:XP_038937673.1 Gene:Igdcc4 / 363081 RGDID:1310919 Length:1345 Species:Rattus norvegicus


Alignment Length:769 Identity:169/769 - (21%)
Similarity:260/769 - (33%) Gaps:245/769 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 VVFNCYIDFPFDAPIPYLVHWTKDNKKIFTWYEQETSTSELFNGRLHLVENHPEFGRASVNLTAI 115
            ||.:|.:......| |..|.|:||...:            |....|||:.|      .|:.|::.
  Rat   144 VVLDCTLGAAAAGP-PTTVTWSKDGDVV------------LERDNLHLLPN------GSLRLSSP 189

  Fly   116 RESD--------------QGWYHCQVSFPNRSPSVRNNGTAYHLAVQGGSL----------IRIP 156
            .|.:              :|.|.|....|              |.|....:          ..:.
  Rat   190 LEPEDSDDEEALSVWKVIEGSYSCLAHGP--------------LGVVASQVAVVKLATLEDFSLH 240

  Fly   157 PVNQTIREGQTAFFHCVMKHPENSQA---SWYKDGVLLQEVQDLVRRFYMGPDGSLSIDPTMMSD 218
            |.:||:.|..||.|.|   |.|...|   :|.||.|.:.|...|:..    |:|.|.|.....||
  Rat   241 PESQTVEENGTARFEC---HTEGLPAPIITWEKDQVTVTEEPRLITL----PNGVLQILDVQDSD 298

  Fly   219 LGEYECKVRNSDGELQTAKAFLNIQYKAK----------VIYAPPEVFLPYGQPAVLDCHFRANP 273
            .|.|.|...||..:..:.:|.|::..:..          ::.||....:..||..||:|...|:|
  Rat   299 AGSYRCVATNSARQRFSQEALLSVALRGSLEATRGQDVVIVAAPENTTVVSGQSVVLECVASADP 363

  Fly   274 -PLKNLRW-EKDGLLFDSYNVPGVFYKMNGSLFFAKVDENHAGSYTCTPYNDLGTDGPSPVISVI 336
             |.  :.| .:||....:    .|......:|..|.....|:|.|.|........|..:....:.
  Rat   364 TPF--VSWVRQDGKPIST----DVIVLGRTNLLIASAQPRHSGVYVCRANKPRTRDFATAAAELR 422

  Fly   337 VLRPPIFSVTPKAIYIQKLGEAAELPCEAIDRDGNNRPSIIWGRKDGQPL-PADRFSL--SGGNL 398
            ||..|..|..|:|: .:.....|...|.|   .|..||::.| ..||.|| |..|..:  .||:|
  Rat   423 VLAAPAISQAPEAL-SRTRASTARFVCRA---SGEPRPTLHW-LHDGAPLRPNGRVKVQGGGGSL 482

  Fly   399 TITGLVEGDRGIYECSATNEAATITAEAEL--MIENIAPRAPYNLTANS-TETCITIRWQPGYLR 460
            .||.:...|.|.|:|.|.|.|.|..|.|.|  ::....|.||..:.|.. :.:.:.:.|:    |
  Rat   483 VITQIGLQDSGYYQCVAENSAGTACAAAPLAVVVREGLPSAPTRVKATPLSSSAVLVAWE----R 543

  Fly   461 PNLE------YTVWY---RLMEAPEWRTLRVLDKKVMEATVQHLQPGKEYEFMVLSQDKYGDGMF 516
            |.|.      :::.|   |.::..|::.  .::....|..|:.|:|..:|||.|::..:.|....
  Rat   544 PELHSEQIIGFSLHYQKARGVDNVEYQF--AVNNDTTELQVRDLEPNTDYEFYVVAYSQLGASRT 606

  Fly   517 SKQFRFQTL----------------PSPIR-------------------------------ADDF 534
            |......||                ||.||                               :.:.
  Rat   607 SSPALVHTLDDVPSAAPQLSLSSPNPSDIRVAWLPLPSSLSNGQVVKYKIEYGSGKEDQVFSTEV 671

  Fly   535 DAQQLQHDLG----------QVTAPAG-GLGAP--W-------------------NLTAISNQQG 567
            ...:.|..|.          :::|..| |.|.|  |                   .|...:..:.
  Rat   672 PGNETQLTLNSLQPNKVYRVRISAGTGAGYGVPSQWMQHRTPGAHNQSHVPFAPAELKVRAKMES 736

  Fly   568 WLLHWE---HPVQGLEGLRLYAVRWWKEPEHFLIGHAETFD------------------------ 605
            .::.|:   ||.| :.|.:||    |:|     :|..|..|                        
  Rat   737 LVVSWQPPPHPTQ-ISGYKLY----WRE-----VGTEEEADGDRPPGGRGDQAWDVGPVRLKKKV 791

  Fly   606 NYYQLRHLKEDTLFKVQVLAV------------GTETQQSVPSHELLIDVPSQR 647
            ..|:|..|....|::|:::|.            |...:...|      |:|.||
  Rat   792 KQYELTQLVPGRLYEVKLVAFNKHEDGYAAVWKGKTEKAPTP------DLPIQR 839

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdlNP_608822.1 IG_like 42..128 CDD:214653 20/90 (22%)
Ig strand C 69..72 CDD:409512 1/2 (50%)
Ig strand E 108..112 CDD:409512 1/3 (33%)
Ig strand F 122..127 CDD:409512 2/4 (50%)
Ig 153..242 CDD:472250 30/91 (33%)
Ig strand B 168..172 CDD:409544 2/3 (67%)
Ig strand C 181..185 CDD:409544 1/6 (17%)
Ig strand E 207..211 CDD:409544 2/3 (67%)
Ig strand F 221..226 CDD:409544 2/4 (50%)
Ig strand G 235..238 CDD:409544 0/2 (0%)
Ig_3 247..322 CDD:464046 20/86 (23%)
Ig 341..428 CDD:472250 32/89 (36%)
Ig strand B 359..363 CDD:409353 1/3 (33%)
Ig strand C 375..380 CDD:409353 1/4 (25%)
Ig strand E 396..400 CDD:409353 2/3 (67%)
Ig strand F 410..415 CDD:409353 2/4 (50%)
Ig strand G 423..426 CDD:409353 1/2 (50%)
FN3 435..524 CDD:238020 21/98 (21%)
FN3 554..636 CDD:238020 23/141 (16%)
Igdcc4XP_038937673.1 Ig 131..223 CDD:472250 23/111 (21%)
Ig strand B 144..148 CDD:409353 2/3 (67%)
Ig strand C 160..164 CDD:409353 1/3 (33%)
Ig strand E 182..186 CDD:409353 1/3 (33%)
Ig strand F 210..215 CDD:409353 2/4 (50%)
Ig_3 237..308 CDD:464046 26/77 (34%)
IG_like 342..423 CDD:214653 20/86 (23%)
Ig strand B 353..357 CDD:409353 2/3 (67%)
Ig strand C 366..370 CDD:409353 0/5 (0%)
Ig strand E 387..391 CDD:409353 1/3 (33%)
Ig strand F 401..406 CDD:409353 2/4 (50%)
Ig 442..514 CDD:472250 29/75 (39%)
Ig strand B 444..448 CDD:409353 1/3 (33%)
Ig strand C 457..461 CDD:409353 1/4 (25%)
Ig strand E 478..484 CDD:409353 3/5 (60%)
FN3 <494..>695 CDD:442628 38/206 (18%)
Ig strand F 494..499 CDD:409353 2/4 (50%)
Ig strand G 507..510 CDD:409353 1/2 (50%)
fn3 724..818 CDD:394996 19/103 (18%)
FN3 842..934 CDD:238020
FN3 942..1034 CDD:238020
Blue background indicates that the domain is not in the aligned region.

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