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Protein Alignment bdl and Kirrel3

DIOPT Version :9

Sequence 1:	NP_608822.1	Gene:	bdl / 33635	FlyBaseID:	FBgn0028482	Length:	719	Species:	Drosophila melanogaster
Sequence 2:	XP_038937320.1	Gene:	Kirrel3 / 315546	RGDID:	1311382	Length:	869	Species:	Rattus norvegicus

Alignment Length:	597	Identity:	130/597 - (21%)
Similarity:	204/597 - (34%)	Gaps:	164/597 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly    43 LEAKVGSHVVFNCY--------------IDFPFDAPI-------------PYLVHWTKDNKK--- 77
            |.|::....|:.|.              :..|.|.||             |..:....||.|
  Rat   115 LRAELQDDAVYECQAIQAAIRSRPARLTVLVPPDDPIILGGPVISLRAGDPLNLTCHADNAKPAA 179

  Fly    78 IFTWYEQETSTSELFNGRLHLVENHPEFGRASVNLTAIRESDQGWYHCQVSFPNRSPSVRNNG-- 140
            ...|..:    .|:.||             |:.:.|.:|:   |.....||....||....||
  Rat   180 SIIWLRK----GEVING-------------ATYSKTLLRD---GKRESIVSTLFISPGDVENGQS 224

  Fly   141 ---TAYHLAVQGGSL------IRIPP-VN-----QTIREGQTAFFHCVMK-HPENSQASWYKDGV 189
               .|.:.|:.||..      |:.|| ||     |.:.|.....|||..| :|..:|..|.|.|.
  Rat   225 IVCRATNKAIPGGKETSVTIDIQHPPLVNLSVEPQPVLEDNIVTFHCSAKANPAVTQYRWAKRGH 289

  Fly   190 LLQEVQDLVRRFYMGPDGSLSIDPTMMSDLGEYECKVRNSDGELQTAKAFLNIQYKAKVIYAPPE 254
            :::|....:.|        .::|.|..|:  ...|:|.|:.|....::. :::.:..::...|..
  Rat   290 IIKEASGELYR--------TTVDYTYFSE--PVSCEVTNALGSTNLSRT-VDVYFGPRMTSEPQS 343

  Fly   255 VFLPYGQPAVLDCHFRANPPLKNLRWEKDGLLFDSYNVPGVFYKMNGSLFFAKVDENHAGSYTC- 318
            :.:..|..||..|.:..||.| .:.|.|.|        .||......:|....|.:..||.|.|
  Rat   344 LLVDLGSDAVFSCAWIGNPSL-TIVWMKRG--------SGVVLSNEKTLTLKSVRQEDAGKYVCR 399

  Fly   319 --TPYNDLGTDGPSPVISVIVLRPPIFS--VTPKAIYIQKLGEAAELPCEAIDRDGNNRPSIIWG 379
              .|....|    ...:::.|..|||.|  .|..|::    ||..::.|........:|  |.|.
  Rat   400 AVVPRVGAG----EREVTLTVNGPPIISSTQTQHALH----GEKGQIKCFIRSTPPPDR--IAWS 454

  Fly   380 RKDG--QPLPADRFSLSGGN--------LTITGLVEGD-RGIYECSATNEAATITAEAELMIENI 433
            .|:.  :...:.|:::...|        |||:.:|..| :.||.|:|.|...:.|....|..:..
  Rat   455 WKENVLESGTSGRYTVETVNTEEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGS 519

  Fly   434 APRAPYNLTANSTETCITI-----------------------RWQ------PGYLRPNLEYTVWY 469
            ..::...|.|.|....:.|                       |.|      ||......|.....
  Rat   520 EMKSGAGLEAESVPMAVIIGVAVGAGVAFLVLMATIVAFCCARSQRSTGGRPGISGRGTEQKARL 584

  Fly   470 RLMEAPEWRTLR--VLDKKVMEATVQHLQP--GKEYE------FMVLSQDKYGDGMFSKQF---- 520
            ||   |....|:  |..|..:...:.|.:|  |:|.|      .:::.:.::......||.
  Rat   585 RL---PRRANLKGVVSAKNDIRVEIVHKEPASGREAEDHTTIKQLMMDRGEFQQDSVLKQLEVLK 646

  Fly   521 ----RFQTLPSP 528
                .||.|..|
  Rat   647 EEEKEFQNLKDP 658

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.