DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bdl and Fas2

DIOPT Version :9

Sequence 1:NP_608822.1 Gene:bdl / 33635 FlyBaseID:FBgn0028482 Length:719 Species:Drosophila melanogaster
Sequence 2:NP_001284854.1 Gene:Fas2 / 31364 FlyBaseID:FBgn0000635 Length:885 Species:Drosophila melanogaster


Alignment Length:829 Identity:176/829 - (21%)
Similarity:284/829 - (34%) Gaps:248/829 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 VGSHVVFNCYIDFPFDAPIPYLV---HWTKDNKKIFTWYEQETSTSELFNGRLHLVENHPEF--- 105
            ||..::..|.   | ..|.|.||   .| |||:        ..:.....|||     |.|..   
  Fly    46 VGKPLILTCR---P-TVPEPSLVADLQW-KDNR--------NNTILPKPNGR-----NQPPMYTE 92

  Fly   106 ---GRA-SVNLTAIRESDQGWYHCQVSFPNRSPSVRNNGTAYHLAVQGGSLIRIPPVNQTIREGQ 166
               |.: ::.:|::.....|.|:|..|:.|.....:......::|:...:    .|.||....||
  Fly    93 TLPGESLALMITSLSVEMGGKYYCTASYANTEILEKGVTIK
TYVAITWTN----APENQYPTLGQ 153

  Fly   167 TAFFHCVMKHPENSQASWYKDGVLLQEVQDLVRRFYMGPDGSLSIDPTMMSDLGEYECKVRNSD- 230
            .....|.:|...|....|.::|..::...|.    |:.....|.|.....||.|.|.|:....: 
  Fly   154 DYVVMCEVKADPNPTIDWLRNGDPIRTTNDK----YVVQTNGLLIRNVQESDEGIYTCRAAVIET 214

  Fly   231 GELQTAKAFLNIQYKAKVIYAPPEVFLPYGQPAVLDCHFRANPPLKNLRWEKDGLLF-----DSY 290
            |||......:.:..:.::|..|..:....|:|...:|..|.. |:..:.|.:|....     |.:
  Fly   215 GELLERTIRVEV
FIQPEIISLPTNLEAVEGKPFAANCTARGK-PVPEISWIRDATQLNVATADRF 278

  Fly   291 NVPGVFYKMNGSLFFAKVDENHAGSYTCTPYNDLGTDGPSPVISVIVLRPPI---FSVTPKAIYI 352
            .|    ....|.:..:.|.::..|:|||...|..|.......::|:| ||.|   ::||.     
  Fly   279 QV----NPQTGLVTISSVSQDDYGTYTCLAKNRAGVVDQKTKLNV
LV-RPQIYELYNVTG----- 333

  Fly   353 QKLGEAAELPCEAIDRDGNNRPSII---WGRKD----GQPLPADRFSL----------SGGNLTI 400
            .:..|.| :.|.|   .|...|:|.   ||.::    ||.....|..|          |.|.|.|
  Fly   334 ARTKEIA-ITCRA---KGRPAPAITFRRWGTQEEYTNGQQDDDPRIILEPNFDEERGESTGTLRI 394

  Fly   401 TGLVEGDRGIYECSATNEAAT------ITAE---------------------------------- 425
            :.....|.|:|:|.|.|:.|.      ||.|                                  
  Fly   395 SNAERSDDGLYQCIARNKGADAYKTGHITVEFAPDFSHMKELPPVFSWEQRKANLSCLAMGIPNA 459

  Fly   426 ----------------AELMIENIAPRA------------------------------------- 437
                            ..|.|....||:                                     
  Fly   460 TIEWHWNGRKIKDLYDTNLKIVGTGPRSDLIVHPVTRQYYSGYKCIATNIHGTAEHDMQ
LKEARV 524

  Fly   438 --------PYNLTANSTETCITIRWQPGYL-RPNLEYTVWYRLMEAPEWRTLRVLDKKVMEAT-- 491
                    |..|||  |.....||.....| .|.|.|:|.|:....|:|.|  ..::.....:  
  Fly   525 PDFVSEAKPSQLTA--TTMTFDIRGPSTELGLPILAYSVQYKEALNPDWST--AYNRSWSPDSPY 585

  Fly   492 -VQHLQPGKEYEFMVLSQDKYGDGMFSKQFRFQTLPSPIRADDFDAQQL----QHDLGQ--VTAP 549
             |:.|:|..||.|...::::.|.|.:...   |...:|.|:...:.:.|    |||..:  |.:|
  Fly   586 IVEGLRPQTEYSFRFAARNQVGLGNWGVN---QQQSTPRRSAPEEPKPLHNPVQHDKEEPVVVSP 647

  Fly   550 AGGLGAPWNLTAISNQQGWLLHWEHPVQGLEGLRLYAVRW---------WKEPEHF--LIGHAET 603
                          ....:.|.|..|....|.:..|.:::         |.|.|:.  .:...||
  Fly   648 --------------YSDHFELRWGVPADNGEPIDRYQIKYCPGVKISGTWTELENSCNTVEVMET 698

  Fly   604 FDNYYQLRHLKEDTLFKVQVL---AVGTETQQSVPSHELL-----IDV--PSQRKV--RALIIGS 656
              ..:::..|..:|.:::::.   |:|    .|.|:..::     |||  .::|:|  .|.|:|.
  Fly   699 --TSFEMTQLVGNTYYRIELKAHNAIG----YSSPASIIMKTTRGIDVIQVAERQVFSSAAIVGI 757

  Fly   657 SVG-------VIFLLCALCAFLYVKRSCLRHLFAKDSSASEDEDTAESG 698
            ::|       |:.|||.:...:.|..:..|.  || .|.||.:|.|:.|
  Fly   758 AIGGVLLLLFVVDLLCCITVHMGVMATMCRK--AK-RSPSEIDDEAKLG 803

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdlNP_608822.1 IG_like 42..128 CDD:214653 22/90 (24%)
Ig 43..131 CDD:299845 23/93 (25%)
I-set 153..242 CDD:254352 22/89 (25%)
Ig 157..242 CDD:299845 22/85 (26%)
Ig_2 252..337 CDD:290606 19/89 (21%)
IG_like 260..327 CDD:214653 17/71 (24%)
I-set 341..428 CDD:254352 30/162 (19%)
IGc2 356..419 CDD:197706 23/79 (29%)
FN3 435..524 CDD:238020 26/137 (19%)
FN3 554..636 CDD:238020 15/95 (16%)
Fas2NP_001284854.1 IG_like 39..133 CDD:214653 24/104 (23%)
IG_like 144..226 CDD:214653 22/85 (26%)
IGc2 152..209 CDD:197706 16/60 (27%)
I-set 230..319 CDD:254352 19/93 (20%)
IGc2 243..309 CDD:197706 16/70 (23%)
IG_like 330..424 CDD:214653 27/102 (26%)
IGc2 339..412 CDD:197706 21/76 (28%)
Ig 447..518 CDD:143165 4/70 (6%)
fn3 534..611 CDD:278470 23/80 (29%)
FN3 640..735 CDD:238020 18/114 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10075
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.