DRSC/TRiP Functional Genomics Resources

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Protein Alignment bdl and syg-1

DIOPT Version :9

Sequence 1:NP_608822.1 Gene:bdl / 33635 FlyBaseID:FBgn0028482 Length:719 Species:Drosophila melanogaster
Sequence 2:NP_001123159.1 Gene:syg-1 / 180555 WormBaseID:WBGene00006365 Length:730 Species:Caenorhabditis elegans


Alignment Length:521 Identity:110/521 - (21%)
Similarity:177/521 - (33%) Gaps:171/521 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PAKRSRTFRQSGSAL-----LALLAIILL--MNISCTSAARDHRRQT------------------ 41
            |...::.:|..|||.     |.:..:.|.  .:.:|..:..||.:..                  
 Worm    69 PLPGNKRYRMVGSAANGEYNLEISNVTLFDDDDFACQISESDHAKAVVSSKAKLTVLVRPTPPKI 133

  Fly    42 -----NLEAKVGSHVVFNCYIDFPFDAPIPYLVHWT----KDNKKIFTWYEQETSTSELFNGRLH 97
                 :|:|..|..:..:|   .......|..:.|.    :..|.|.:|..:..|.   |.|   
 Worm   134 VKSHHSLKAIAGDPITQSC---LSRKGKPPPTIGWAIASDEHGKHIVSWLGESRSK---FGG--- 189

  Fly    98 LVENHPEFGRASV----------------------------NLTAI--RESDQGWYHC---QVSF 129
             :...||..:.:|                            ||:.|  .|.|..:..|   .::|
 Worm   190 -IHAKPEISQETVIAHVNETTQVEEGGNNSREDSSIYSIMSNLSFIPRPEDDHKYLICISQHMTF 253

  Fly   130 PNR--SPSVRNNGTAYHLAVQGGSLIRIPPVNQTI------REGQTAFFHCVM--KHPENSQASW 184
            ||:  ..||:.            ||...|.:|.|:      ||..:|...|.:  |..:|.:.||
 Worm   254 PNKIEVDSVKL------------SLRYAPQINLTVASKLPLRENGSALLACNVNAKPLDNVKISW 306

  Fly   185 YKDGVLLQEVQDLVRRFYMGPDGSLSIDPTMMSDLG-EYECKVRNSDGELQTAKAF--LNIQYKA 246
            ||....|:|..|           :|:.:...|.|.. :..|:..|   |:.|.:..  ||:.:.|
 Worm   307 YKGNQKLRETGD-----------TLTFETLKMEDHNRDIFCEATN---EIGTTRGSIKLNVAFGA 357

  Fly   247 KVIYAPPEVFLPYGQPAVLDCHFRANPPLKNLRWEKDGLLFDSYNVPGVFYKMNGS--------- 302
            :::....:..:..|..|...|...|||                  .|.:|:....|         
 Worm   358 RIMSTSQDKEVNEGDNAFFHCATLANP------------------APAIFWTRGDSDEIIGHGEN 404

  Fly   303 LFFAKVDENHAGSYTCTPYNDLGTDG-PSPVIS--VIVLRPPIFSVTPKAIYIQKLGEAAELPCE 364
            |....|.....|:|.||    ...:| ...::|  :.:..||  :|:.|......|.||.|:.||
 Worm   405 LTLENVRTWQQGNYNCT----ATVEGFRKQILSHYLHIRGPP--TVSMKDEVSASLDEATEIICE 463

  Fly   365 AIDRDGNNRPSIIW---GRK----DGQ------PLPADRFSLSGGNLTITGLVEGDRGIYECSAT 416
            ...|...|  ::.|   |::    :|:      |.|..:.|:    |.|..|.|.|.|:|.|||.
 Worm   464 ISGRPKTN--NVRWTVNGKEINFNNGRITVHQYPKPYGKESI----LKIKDLKEEDFGVYNCSAN 522

  Fly   417 N 417
            |
 Worm   523 N 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdlNP_608822.1 IG_like 42..128 CDD:214653 21/122 (17%)
Ig 43..131 CDD:299845 22/124 (18%)
I-set 153..242 CDD:254352 24/99 (24%)
Ig 157..242 CDD:299845 23/95 (24%)
Ig_2 252..337 CDD:290606 17/96 (18%)
IG_like 260..327 CDD:214653 15/75 (20%)
I-set 341..428 CDD:254352 28/90 (31%)
IGc2 356..419 CDD:197706 24/75 (32%)
FN3 435..524 CDD:238020
FN3 554..636 CDD:238020
syg-1NP_001123159.1 I-set 24..124 CDD:254352 10/54 (19%)
Ig 30..124 CDD:299845 10/54 (19%)
Ig <151..265 CDD:299845 23/135 (17%)
Ig_2 276..353 CDD:290606 21/90 (23%)
IG_like 283..353 CDD:214653 21/83 (25%)
IG_like 363..427 CDD:214653 15/85 (18%)
Ig_2 368..438 CDD:290606 17/91 (19%)
Ig 440..528 CDD:299845 29/92 (32%)
IG_like 450..535 CDD:214653 25/80 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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