DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bdl and Ncam2

DIOPT Version :9

Sequence 1:NP_608822.1 Gene:bdl / 33635 FlyBaseID:FBgn0028482 Length:719 Species:Drosophila melanogaster
Sequence 2:NP_001106679.1 Gene:Ncam2 / 17968 MGIID:97282 Length:837 Species:Mus musculus


Alignment Length:717 Identity:158/717 - (22%)
Similarity:261/717 - (36%) Gaps:147/717 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 EAKVGSHVVFNCYIDFPFDAPIPYLVHWTKDNKKIFTWYEQETSTSELFNGRLHLVENHPEFGRA 108
            |.|.|......|.:.   .:|.| .|.|...|:::.|          :.:.|..::.|:      
Mouse   125 EFKQGEDAEVVCRVS---SSPAP-AVSWLYHNEEVTT----------IPDNRFAVLANN------ 169

  Fly   109 SVNLTAIRESDQGWYHCQVSFPNRSP-SVRNNGTAYHLAVQGGSLIRIPPV--------NQTIRE 164
            ::.:..|.:||:|.|.|:.....|.. ..|:      :.|    ::.:||.        |.|...
Mouse   170 NLQILNINKSDEGIYRCEGRVEAR
GEIDFRD------IIV----IVNVPPAIMMPQKSFNATAER 224

  Fly   165 GQTAFFHCVMKHPENSQASWYKDGVLLQEVQDLVRRFYMGPDGSLSIDPTMMSDLGEYECKVRNS 229
            |:.....|......:...||:::|.|::|.:..:.:   |.:..|::...:..|.|.|.||..|.
Mouse   225 GEEMTLTCKASGSPDPTISWFRNGKLIEENEKYILK---GSNTELTVRNIINKDGGSYVCKATNK 286

  Fly   230 DGELQTAKAFLNIQYKAKVIYAPPEVFLPYGQPAVLDCHFRANPPLKNLRWEK--DGLLF-DSYN 291
            .||.| .:|||.:..:..::....|.....|. ..|.|..... |:..:.|::  ||::| :...
Mouse   287 AGEDQ-KQAFLQVFVQPHILQLKNETTSENGH-VTLVCEAEGE-PVPEITWKRAIDGVMFSEGDK 348

  Fly   292 VPGVFYKMNG-----SLFFAKVDENHAGSYTCTPYNDLGTDGPSPVISVIVLRPPIFSVTPKAIY 351
            .|....::.|     ||....|..:.:|.|.|...:.:|  |....:.:.:...|.| |:.:.:|
Mouse   349 SPDGRIEVKGQHGRSSLHIRDVKLSDSGRYDCEAASRIG--GHQRSMHLDI
EYAPKF-VSNQTMY 410

  Fly   352 IQKLGEAAELPCEAIDRDGNNRPSIIWGRKDGQPLPADRF----SLSGGN---LTITGLVEGDRG 409
            ....|....:.|   |...|...||.| |::...|||...    :.|.|.   |.|....:.|.|
Mouse   411 YSWEGNPINISC---DVTANPPASIHW-RREKLLLPAKNTTHLKTHSVGRKMILEIAPTSDNDFG 471

  Fly   410 IYECSATNEAATITAEAELMIENIAPRAPYNL-TANSTETCITIRWQPGYLR---PNLEYTVWYR 470
            .|.|:|||...|...|..|.:.:: |.:|:.: ....::|...|.:......   |...|.|..:
Mouse   472 RYNCTATNRIGTRFQEYILELADV-PSSPHGVKIIELSQTTAKISFNKPESHGGVPIHHYQVDVK 535

  Fly   471 LMEAPEWRTLRVLDKKVMEATVQHLQPGKEYEFMVLSQDKYGDGMFSKQFRFQTLP--------- 526
            .:.:..|:.:|....:.| ..:..|:|...||..|.:.:..|.|.:||...|||||         
Mouse   536 EVASETWKIVRSHGVQTM-VVLSSLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSPPSI 599

  Fly   527 --SPIRADDFDAQQLQHDLGQVTAPAGGLGAP-----WNLTAISNQQGWLLHWEHPVQGLEGLRL 584
              .|.....|.....:.|.|         |||     ....:...:..||   |..|||      
Mouse   600 HGQPSSGKSFKISITKQDDG---------GAPILEYIVKYRSKDKEDQWL---EKKVQG------ 646

  Fly   585 YAVRWWKEPEHFLIGHAETFDNYYQLRHLKEDTLFKVQVLAVG-------TETQQSVPSHELLI- 641
                   ..:|.:            |.||:....::||:.|..       |..:.|:|....:| 
Mouse   647 -------NKDHII------------LEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPKPNIIK 692

  Fly   642 DVPSQRKVRALIIGSSVGVIFLLCAL----CAFLYVKRSC------LRHLFAKDSSASEDEDTAE 696
            |..........|||..|..:.|:..:    |.|:   |.|      .|.:..|.|.:|......|
Mouse   693 DTLFNGLGLGAIIGLGVAALLLILVVTDVSCFFI---RQCGLLMCITRRMCGKKSGSSGKSKELE 754

  Fly   697 SG 698
            .|
Mouse   755 EG 756

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdlNP_608822.1 IG_like 42..128 CDD:214653 18/83 (22%)
Ig 43..131 CDD:299845 18/86 (21%)
I-set 153..242 CDD:254352 25/96 (26%)
Ig 157..242 CDD:299845 24/92 (26%)
Ig_2 252..337 CDD:290606 19/92 (21%)
IG_like 260..327 CDD:214653 17/74 (23%)
I-set 341..428 CDD:254352 28/93 (30%)
IGc2 356..419 CDD:197706 22/69 (32%)
FN3 435..524 CDD:238020 20/92 (22%)
FN3 554..636 CDD:238020 18/93 (19%)
Ncam2NP_001106679.1 Ig1_NCAM-2 21..112 CDD:143274
I-set 22..111 CDD:254352
I-set 117..193 CDD:254352 18/87 (21%)
IGc2 128..189 CDD:197706 16/80 (20%)
Ig 208..301 CDD:299845 25/96 (26%)
I-set 215..298 CDD:254352 23/86 (27%)
Ig 300..397 CDD:299845 19/100 (19%)
IG_like 308..395 CDD:214653 19/90 (21%)
IG_like 413..491 CDD:214653 24/81 (30%)
IGc2 414..482 CDD:197706 22/71 (31%)
FN3 496..588 CDD:238020 20/92 (22%)
fn3 594..678 CDD:278470 20/120 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 764..810
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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