DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bdl and Ncam1

DIOPT Version :9

Sequence 1:NP_608822.1 Gene:bdl / 33635 FlyBaseID:FBgn0028482 Length:719 Species:Drosophila melanogaster
Sequence 2:XP_006510118.1 Gene:Ncam1 / 17967 MGIID:97281 Length:1162 Species:Mus musculus


Alignment Length:729 Identity:165/729 - (22%)
Similarity:265/729 - (36%) Gaps:168/729 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 TNLEAKVGSHVVFNCYIDFPFDAPIPYLVHWTKDNKKIFTWYEQETSTSELFNGRLHLVENHPEF 105
            |..|.|.|...|..|.:    .:.:|..:.|....:.:.  .:::.....|.|..|         
Mouse   125 TPQEFKEGEDAVIVCDV----VSSLPPTIIWKHKGRDVI--LKKDVRFIVLSNNYL--------- 174

  Fly   106 GRASVNLTAIRESDQGWYHCQVSFPNRSPSVRNNGTAYHLAVQGGSLIRIPP--------VNQTI 162
                 .:..|:::|:|.|.|:       ..:...|......:|  .::.:||        ||.|.
Mouse   175 -----QIRGIKKTDEGTYRCE-------GRILARGEINFKDIQ--VIVNVPPTVQARQSIVNATA 225

  Fly   163 REGQTAFFHCVMKHPENSQASWYKDGVLLQ-EVQDLVRRFYMGPDGSLSIDPTMMSDLGEYECKV 226
            ..||:....|..........||.|||..:: |.:|..:..:......|:|.....:|..||.|..
Mouse   226 NLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIA 290

  Fly   227 RNSDGELQTAKAFLNIQYKAKVIYAPPEVFLPYGQPAVLDCHFRANPPLKNLRW----------- 280
            .|..|| |.|...|.:..|.|:.|...:..:...:...|.|. .:..|:.::.|           
Mouse   291 ENKAGE-QDASIHLKVFAKPKITYVENQTAMELEEQVTLTCE-ASGDPIPSITWRTSTRNISSEE 353

  Fly   281 -------EKDGLLFDSYNVPGVFYKMNGSLFFAKVDENHAGSYTCTPYNDLGTDGPSPVISVIVL 338
                   ||...| |.:.|.....::: ||....:....||.|.||..|.:|.|..|..:.| ..
Mouse   354 KASWTRPEKQETL-DGHMVVRSHARVS-SLTLKSIQYTDAGEYICTASNTIGQDSQSMYLEV-QY 415

  Fly   339 RPPIFSVTPKAIYIQKLGEAAELPCEAIDRDGNNRPS--IIWGRKDGQPLPADRFS-------LS 394
            .|.:..  |.|:|..: |....:.||..     ..||  |.|.| |||.||:..:|       .|
Mouse   416 APKLQG--PVAVYTWE-GNQVNITCEVF-----AYPSATISWFR-DGQLLPSSNYSNIKIYNTPS 471

  Fly   395 GGNLTITGLVEGDRGIYECSATNEAATITAEAELMIENIAPRA-------PYNLTA----NSTET 448
            ...|.:|...|.|.|.|.|:|.|.....:.|. ::::...|.:       ||:.||    :..|.
Mouse   472 ASYLEVTPDSENDFGNYNCTAVNRIGQESLEF-ILVQADTPSSPSIDRVEPYSSTAQVQFDEPEA 535

  Fly   449 CITIRWQPGYLRPNLEYTVWYRLMEAPEWRTLRVLDKKV--ME--ATVQHLQPGKEYEFMVLSQD 509
            ...:        |.|:|...::.:....|. .:..|.|.  ||  .|:..|:|...|...:.:.:
Mouse   536 TGGV--------PILKYKAEWKSLGEESWH-FKWYDAKEANMEGIVTIMGLKPETRYSVRLAALN 591

  Fly   510 KYGDGMFSKQFRFQTLP------------------SPIRADDFDAQQL-QHDL--GQVTAP--AG 551
            ..|.|..|....|:|.|                  || ||..:....| ..||  |:.:||  .|
Mouse   592 GKGLGEISAATEFKTQPVHSPPPLAPANSSTLVPLSP-RATTWPLPVLPTTDLSKGEPSAPKLEG 655

  Fly   552 GLGAPWNLTAISNQQGWLLHWEHPVQGLEGLRLYAVRW-------WKEPEHFLIGHAETFDNYYQ 609
            .:|...|...::     |:..:   .|...:|.|.|::       || ||..|    .:..::..
Mouse   656 QMGEDGNSIKVN-----LIKQD---DGGSPIRHYLVKYRAKLASEWK-PEIRL----PSGSDHVM 707

  Fly   610 LRHLKEDTLFKVQVLAVGTETQQ--SVPSHELL------IDVPSQRKVRA-LIIGSSVGVIFLLC 665
            |:.|..:..::|.|:|   |.||  |..:|.:.      ..:|:.....| |..|:.||::.::.
Mouse   708 LKSLDWNAEYEVYVVA---ENQQGKSKAAHFVFRTSAQPTAIPANGSPTAGLSTGAIVGILIVIF 769

  Fly   666 AL--------CAFL 671
            .|        |.||
Mouse   770 VLLLVVMDITCYFL 783

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdlNP_608822.1 IG_like 42..128 CDD:214653 15/85 (18%)
Ig 43..131 CDD:299845 15/87 (17%)
I-set 153..242 CDD:254352 27/97 (28%)
Ig 157..242 CDD:299845 26/93 (28%)
Ig_2 252..337 CDD:290606 21/102 (21%)
IG_like 260..327 CDD:214653 18/84 (21%)
I-set 341..428 CDD:254352 28/95 (29%)
IGc2 356..419 CDD:197706 24/71 (34%)
FN3 435..524 CDD:238020 22/103 (21%)
FN3 554..636 CDD:238020 21/90 (23%)
Ncam1XP_006510118.1 Ig1_NCAM-1 20..115 CDD:143273
IG 124..190 CDD:214652 15/84 (18%)
Ig3_NCAM-1_like 211..308 CDD:143207 27/97 (28%)
Ig_NCAM-1 307..413 CDD:143277 23/108 (21%)
Ig_3 417..494 CDD:372822 27/85 (32%)
FN3 509..606 CDD:238020 22/105 (21%)
fn3 649..731 CDD:365830 23/97 (24%)
PHA03247 <905..1140 CDD:223021
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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