DRSC/TRiP Functional Genomics Resources

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Protein Alignment HTR7 and mAChR-C

DIOPT Version :10

Sequence 1:NP_062873.1 Gene:HTR7 / 3363 HGNCID:5302 Length:479 Species:Homo sapiens
Sequence 2:NP_572358.1 Gene:mAChR-C / 31626 FlyBaseID:FBgn0029909 Length:371 Species:Drosophila melanogaster


Alignment Length:401 Identity:103/401 - (25%)
Similarity:169/401 - (42%) Gaps:87/401 - (21%)


- Green bases have known domain annotations that are detailed below.


Human    53 TASPAPTWD--APPD------------NASGCGEQI-----NYGRVEKVVIGSILTL-----ITL 93
            |:|.:|.||  :.|:            ||:....:|     ::|      .|.:|.|     :.:
  Fly     4 TSSSSPAWDYRSSPEALGVVPFLWQHQNATETPTEITLQATSFG------AGHLLWLAINAFLFV 62

Human    94 LTIAGNCLVVISVCFVKKLRQP-SNYLIVSLALADLSVAVAV---MPFVSVTDL--IGGKWIFGH 152
            |.:.||.|.:::|...:.||.. ||..|:|||::|..|.:|:   :.|...:|:  :.|..:...
  Fly    63 LILGGNILTIVAVRTCRHLRSVISNLFILSLAVSDFCVGLALPYHLVFYMGSDIGAMRGPCLLRF 127

Human   153 FFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMILSVWLLSASITLPP 217
            |..       :..|..|::||..|::|||:.:...|.|......:....:|:..|.|.|.:.|.|
  Fly   128 FLL-------ICACCVSMLTLISIAVDRYIAVVYALHYRRYMTRRVAYSIIIFNWCLGALVALLP 185

Human   218 LFGW-----AQNVNDDKVCLISQDFGYTIYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKHKFPG 277
            :| |     ||....|:|...    ||........|.|....|..:|::|.:.|.|.|.:.:   
  Fly   186 VF-WNRWPDAQACEFDEVLAP----GYIAGVITPGFVIIWICMFLVYWRIMREASKQALRLR--- 242

Human   278 FPRVEPDSVIALNGIVKLQKEVEECANLSRLLKHERKNISIFKREQKAATTLGIIVGAFTVCWLP 342
                  .||:         ...:|...:..||.|.         :.|:...:..|:|.||:||||
  Fly   243 ------QSVV---------YNTDEATTMRNLLLHP---------DWKSVQIVVFIMGCFTLCWLP 283

Human   343 FFLLSTARPF-ICGTSCSCIPLWVERTFLWLGYANSLINPFIYAFFNRDLRTTYRSLLQCQ-YRN 405
            :|.::.|:.| ||.:|.     .:.:|...|..|||.:||.||::.|...|..:...|.|: .|.
  Fly   284 YFCVAIAQLFSICQSSS-----MIYKTTFSLAIANSALNPIIYSWKNSGFRRAFVQTLCCRTARQ 343

Human   406 INRKLSAAGMH 416
            ...:|.|...|
  Fly   344 CEDQLPADSKH 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HTR7NP_062873.1 7tmA_5-HT7 97..395 CDD:320452 83/309 (27%)
TM helix 2 116..142 CDD:320452 10/28 (36%)
TM helix 3 155..185 CDD:320452 8/29 (28%)
TM helix 4 197..219 CDD:320452 6/21 (29%)
TM helix 5 236..265 CDD:320452 7/28 (25%)
TM helix 6 320..350 CDD:320452 10/29 (34%)
TM helix 7 363..388 CDD:320452 9/24 (38%)
mAChR-CNP_572358.1 7tm_classA_rhodopsin-like 53..325 CDD:410626 83/315 (26%)
TM helix 1 53..78 CDD:410626 6/24 (25%)
TM helix 2 86..111 CDD:410626 9/24 (38%)
TM helix 3 123..153 CDD:410626 9/36 (25%)
TM helix 4 166..185 CDD:410626 5/18 (28%)
TM helix 5 204..229 CDD:410626 6/28 (21%)
TM helix 6 261..291 CDD:410626 11/38 (29%)
TM helix 7 300..325 CDD:410626 9/29 (31%)

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