Protein Alignment RpL40 and Nedd8

DIOPT Version :9

• Sequence 1: NP_001260018.1
• Gene: RpL40 / 33629
• FlyBaseID: FBgn0003941
• Length: 128
• Species: Drosophila melanogaster
• Sequence 2: NP_001286070.1
• Gene: Nedd8 / 35151
• FlyBaseID: FBgn0032725
• Length: 84
• Species: Drosophila melanogaster
• Alignment Length: 82
• Identity: 46/82 - (56%)
• Similarity: 63/82 - (76%)
• Gaps: 2/82 - (2%)

  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            |.|.|||||||.|.:::||:|.::.:|.::::||||||.||||||:|||:.|.:|.:||.:|..|
  Fly     1 MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGS 65

  Fly    66 TLHLVLRLRGG--IIEP 80
            .|||||.||||  |:.|
  Fly    66 VLHLVLALRGGDSILTP 82

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RpL40	NP_001260018.1	Ubl_ubiquitin	1..76	CDD:340501	42/74 (57%)
		Ribosomal_L40e	79..126	CDD:395807	1/2 (50%)
Nedd8	NP_001286070.1	Ubl_NEDD8	3..76	CDD:340504	41/72 (57%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45440130
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D135494at33392
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR10666
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	3.950