DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment RpL40 and CG11700

DIOPT Version :9

Sequence 1:	NP_001260018.1	Gene:	RpL40 / 33629	FlyBaseID:	FBgn0003941	Length:	128	Species:	Drosophila melanogaster
Sequence 2:	NP_572306.1	Gene:	CG11700 / 31564	FlyBaseID:	FBgn0029856	Length:	301	Species:	Drosophila melanogaster

Alignment Length:	121	Identity:	81/121 - (66%)
Similarity:	87/121 - (71%)	Gaps:	27/121 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            |||||||||||||||||||||:||||||:|.||||||||||||||||||||||||||||||||||
  Fly   153 MQIFVKTLTGKTITLEVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 217

  Fly    66 TLHLVLRLRGGI---------------IEPSLRILAQKYNCDKMICRKCYARLHPR 106
            |||||||||||:               :|||..|...|            ||:|.:
  Fly   218 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIKHVK------------ARIHDK 261

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
RpL40	NP_001260018.1	Ubl_ubiquitin	1..76	CDD:340501	71/74 (96%)
RpL40	NP_001260018.1	Ribosomal_L40e	79..126	CDD:395807	8/28 (29%)
CG11700	NP_572306.1	Ubiquitin	1..76	CDD:176398
		UBQ	1..72	CDD:214563
		Ubiquitin	77..152	CDD:176398
		UBQ	77..148	CDD:214563
		Ubiquitin	153..228	CDD:176398	71/74 (96%)
		UBQ	153..224	CDD:214563	67/70 (96%)
		UBQ	229..296	CDD:214563	8/45 (18%)
		UBQ	229..296	CDD:294102	8/45 (18%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45440129
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D135494at33392
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR10666
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	3.950