Protein Alignment RpL40 and ubi5

DIOPT Version :10

• Sequence 1: NP_476776.1
• Gene: RpL40 / 33629
• FlyBaseID: FBgn0003941
• Length: 128
• Species: Drosophila melanogaster
• Sequence 2: NP_594058.1
• Gene: ubi5 / 2542138
• PomBaseID: SPAC589.10C
• Length: 150
• Species: Schizosaccharomyces pombe
• Alignment Length: 146
• Identity: 82/146 - (56%)
• Similarity: 90/146 - (61%)
• Gaps: 43/146 - (29%)

  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            ||||||||||||||||||.||||:|||:|||||||||||||||||||||||||||||||||||||
pombe     1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

  Fly    66 TLHLVLRLRGG--------IIEP--------SLRILAQKY-----------------NC------ 91
            |||||||||||        ...|        .:.:...||                 ||
pombe    66 TLHLVLRLRGGGKKRKKKTYTTPKKIKHKHKKVELAVLKYYKVEDDGSVKRLRRECPNCGASTFM 130

  Fly    92 ----DKMICRKCYARL 103
                |::.|.:|:..|
pombe   131 ANHKDRLYCGRCHLTL 146

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RpL40	NP_476776.1	Ubl_ubiquitin	1..76	CDD:340501	71/74 (96%)
		Ribosomal_L40e	79..126	CDD:395807	9/60 (15%)
ubi5	NP_594058.1	Ubl_ubiquitin	1..76	CDD:340501	71/74 (96%)
		Ribosomal_S27	103..145	CDD:460261	7/41 (17%)