Protein Alignment RpL40 and ubq-2

DIOPT Version :9

• Sequence 1: NP_001260018.1
• Gene: RpL40 / 33629
• FlyBaseID: FBgn0003941
• Length: 128
• Species: Drosophila melanogaster
• Sequence 2: NP_499695.1
• Gene: ubq-2 / 176718
• WormBaseID: WBGene00006728
• Length: 128
• Species: Caenorhabditis elegans
• Alignment Length: 128
• Identity: 119/128 - (92%)
• Similarity: 122/128 - (95%)
• Gaps: 0/128 - (0%)

  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            ||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||
 Worm     1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

  Fly    66 TLHLVLRLRGGIIEPSLRILAQKYNCDKMICRKCYARLHPRATNCRKKKCGHTNNLRPKKKLK 128
            ||||||||||||||||||.|||||||||.|||||||||.|||:|||||||||::.||.|||||
 Worm    66 TLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSSELRIKKKLK 128

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RpL40	NP_001260018.1	Ubl_ubiquitin	1..76	CDD:340501	73/74 (99%)
		Ribosomal_L40e	79..126	CDD:395807	38/46 (83%)
ubq-2	NP_499695.1	Ubiquitin	1..76	CDD:176398	73/74 (99%)
		UBQ	1..72	CDD:214563	69/70 (99%)
		Ribosomal_L40e	78..126	CDD:279372	39/47 (83%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165983
Domainoid	1	1.000	140	1.000	Domainoid score	I2948
eggNOG	1	0.900	-	-		E1_COG1552
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H68307
Inparanoid	1	1.050	240	1.000	Inparanoid score	I2112
Isobase	1	0.950	-	0	Normalized mean entropy	S13
OMA	1	1.010	-	-		QHG53637
OrthoDB	1	1.010	-	-		D1536766at2759
OrthoFinder	1	1.000	-	-		FOG0003235
OrthoInspector	1	1.000	-	-		oto19729
orthoMCL	1	0.900	-	-		OOG6_101560
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1137
SonicParanoid	1	1.000	-	-		X2190
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	15	14.690