Protein Alignment RpL40 and F52C6.2

DIOPT Version :9

• Sequence 1: NP_001260018.1
• Gene: RpL40 / 33629
• FlyBaseID: FBgn0003941
• Length: 128
• Species: Drosophila melanogaster
• Sequence 2: NP_494128.3
• Gene: F52C6.2 / 173558
• WormBaseID: WBGene00018659
• Length: 228
• Species: Caenorhabditis elegans
• Alignment Length: 69
• Identity: 32/69 - (46%)
• Similarity: 50/69 - (72%)
• Gaps: 1/69 - (1%)

  Fly     3 IFVKTLT-GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66
            :|||..| |||..:.::.:|||..:|.|:|:||||||:||||:|.|.:|.|.||::...:::.::
 Worm   156 VFVKNSTGGKTTAVSIKNTDTIGTLKLKVQEKEGIPPNQQRLLFKGSELMDYRTVAHCGLRQGTS 220

  Fly    67 LHLV 70
            |.||
 Worm   221 LDLV 224

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RpL40	NP_001260018.1	Ubl_ubiquitin	1..76	CDD:340501	32/69 (46%)
		Ribosomal_L40e	79..126	CDD:395807
F52C6.2	NP_494128.3	ubiquitin	157..224	CDD:365970	30/66 (45%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1536766at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010