DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL40 and LOC1281152

DIOPT Version :10

Sequence 1:NP_476776.1 Gene:RpL40 / 33629 FlyBaseID:FBgn0003941 Length:128 Species:Drosophila melanogaster
Sequence 2:XP_321091.4 Gene:LOC1281152 / 1281152 VectorBaseID:AGAMI1_000229 Length:236 Species:Anopheles gambiae


Alignment Length:88 Identity:57/88 - (64%)
Similarity:74/88 - (84%) Gaps:1/88 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            |||||||||||||||:|..|:|:.::|:||:.:|||.|||||:|||||||:|.|.:||||||..|
Mosquito     1 MQIFVKTLTGKTITLDVIASETVLDIKSKIEQREGIAPDQQRIIFAGKQLDDCRIISDYNIQHGS 65

  Fly    66 TLHLVLRLRGGIIEPSLRILAQK 88
            |:||||||:|| ::..:|:|..|
Mosquito    66 TMHLVLRLKGG-MQIFVRMLTGK 87

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL40NP_476776.1 Ubl_ubiquitin 1..76 CDD:340501 52/74 (70%)
Ribosomal_L40e 79..126 CDD:395807 3/10 (30%)
LOC1281152XP_321091.4 None

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